Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37554 | Sorghum | cytosol, plastid | 85.08 | 85.99 |
| TraesCS5A01G387500.1 | Wheat | cytosol | 84.87 | 85.96 |
| TraesCS5D01G397400.1 | Wheat | cytosol, plastid | 84.45 | 85.53 |
| TraesCS5B01G053000.1 | Wheat | cytosol, plastid | 84.45 | 85.53 |
| TraesCS5B01G392600.1 | Wheat | cytosol, plastid | 84.24 | 85.32 |
| Zm00001d034012_P001 | Maize | cytosol, plastid | 83.82 | 84.71 |
| TraesCS5A01G047900.1 | Wheat | cytosol, plastid | 76.05 | 84.58 |
| HORVU5Hr1G094840.5 | Barley | mitochondrion, plastid | 84.03 | 81.47 |
| Zm00001d013272_P001 | Maize | cytosol | 83.4 | 81.35 |
| GSMUA_Achr4P03650_001 | Banana | cytosol | 70.8 | 71.25 |
| GSMUA_Achr3P29280_001 | Banana | cytosol | 70.17 | 70.91 |
| VIT_00s0508g00020.t01 | Wine grape | cytosol | 66.81 | 66.53 |
| PGSC0003DMT400065476 | Potato | cytosol | 65.55 | 65.96 |
| KRH51180 | Soybean | cytosol | 65.34 | 65.61 |
| CDY32243 | Canola | cytosol | 64.29 | 65.52 |
| KRH01973 | Soybean | cytosol | 65.13 | 65.4 |
| CDY34469 | Canola | cytosol | 64.08 | 65.31 |
| Solyc08g065990.2.1 | Tomato | cytosol | 64.08 | 64.62 |
| AT4G16440.1 | Thale cress | cytosol | 64.08 | 64.35 |
| Bra038459.1-P | Field mustard | cytosol | 64.5 | 62.53 |
| VIT_00s1693g00010.t01 | Wine grape | cytosol | 8.4 | 45.98 |
Protein Annotations
| Gene3D:3.40.50.1780 | Gene3D:3.40.950.20 | EntrezGene:4334110 | MapMan:7.11.3.2.4 | ProteinID:AAL58974.1 | ProteinID:ABF98877.1 |
| ProteinID:BAF13185.1 | ProteinID:BAS86384.1 | InterPro:Fe_hydrogenase | InterPro:Fe_hydrogenase_lsu_C | InterPro:Fe_hydrogenase_ssu | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003954 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 |
| GO:GO:0051536 | GO:GO:0055114 | GO:GO:0070482 | EnsemblPlantsGene:Os03g0748700 | EnsemblPlants:Os03t0748700-01 | PFAM:PF02256 |
| PFAM:PF02906 | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF6 | UniProt:Q10CV7 | SMART:SM00902 | SUPFAM:SSF53920 |
| UniParc:UPI00000A386A | RefSeq:XP_015630589.1 | SEG:seg | : | : | : |
Description
IRON-SULFUR CLUSTER PROTEIN 38Iron hydrogenase domain containing protein. (Os03t0748700-01)
Coordinates
chr3:-:30810342..30814716
Molecular Weight (calculated)
52293.6 Da
IEP (calculated)
7.435
GRAVY (calculated)
-0.166
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSASS RFSPALQASD LNDFIAPSQD CIISLNKGPS ARRLPIKQKE IAVSTNPPEE AVKISLKDCL ACSGCITSAE TVMLEKQSLG DFITRINSDK
101: AVIVSVSPQS RASLAAFFGL SQSQVFRKLT ALFKSMGVKA VYDTSSSRDL SLIEACSEFV TRYHQNQLSS GKEAGKNLPM LSSACPGWIC YAEKTLGSFI
201: LPYISAVKSP QQAIGAAIKH HMVGKLGLKP HDVYHVTVMP CYDKKLEAVR DDFVFSVEDK DVTEVDSVLT TGEVLDLIQS RSVDFKTLEE SPMDRLLTNV
301: DDDGQLYGVS GGSGGYAETV FRHAAHVLFD RKIEGSVDFR ILRNSDFREV TLEVEGKPVL KFALCYGFRN LQNIIRKIKM GKCEYHFIEV MACPSGCLNG
401: GGQIKPAKGQ SAKDLIQLLE DVYIQDVSVS NPFENPIAKR LYDEWLGQPG SENAKKYLHT KYHPVVKSVA SQLQNW
101: AVIVSVSPQS RASLAAFFGL SQSQVFRKLT ALFKSMGVKA VYDTSSSRDL SLIEACSEFV TRYHQNQLSS GKEAGKNLPM LSSACPGWIC YAEKTLGSFI
201: LPYISAVKSP QQAIGAAIKH HMVGKLGLKP HDVYHVTVMP CYDKKLEAVR DDFVFSVEDK DVTEVDSVLT TGEVLDLIQS RSVDFKTLEE SPMDRLLTNV
301: DDDGQLYGVS GGSGGYAETV FRHAAHVLFD RKIEGSVDFR ILRNSDFREV TLEVEGKPVL KFALCYGFRN LQNIIRKIKM GKCEYHFIEV MACPSGCLNG
401: GGQIKPAKGQ SAKDLIQLLE DVYIQDVSVS NPFENPIAKR LYDEWLGQPG SENAKKYLHT KYHPVVKSVA SQLQNW
001: MSEKFSPTLR LGDLNDFIAP SQACVISLKD SKPIVKKSDR PQVVIAPKQQ LEPVKISLKD CLACSGCITS AETVMLEKQS LDEFLSALSK GKDVVVSVSP
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW
101: QSRASLAVHY DISPLQVFKK LTTFLKSLGV KAVFDTSCSR DLVLIESCNE FVSRYKQANS DDGENSQSPL PVLSSACPGW ICYAEKQLGS YVLPYVSSVK
201: SPQQAIGAAI KHHLCQALGL RLHEVYHVTV MPCYDKKLEA ARDDFVFDDG TQDNGDLKLT EVDSVLTTGE IMDLIKLKGV DFKDLEESPL DRVLTNVTEE
301: GDLYGVAGSS GGYAETIFRH AAKALFGQTI EGPLEFKTLR NSDFREVTLQ LEGKTVLKFA LCYGFQNLQN IVRRVKTRKC DYQYVEIMAC PAGCLNGGGQ
401: IKPKTGQSQK ELIHSLEATY MNDTTLNTDP YQNPTAKRLF EEWLKEPGSN EAKKYLHTQY HPVVKSVTSQ LNNW
Arabidopsis Description
NAR1NAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V110]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.