Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65427 | Canola | cytosol | 30.77 | 62.18 |
| AT4G14260.1 | Thale cress | nucleus | 47.69 | 49.08 |
| AT5G46130.1 | Thale cress | mitochondrion | 41.28 | 42.82 |
| AT5G46140.1 | Thale cress | cytosol | 31.28 | 42.21 |
| AT5G67040.1 | Thale cress | mitochondrion | 17.44 | 41.21 |
| AT4G25930.1 | Thale cress | mitochondrion | 37.18 | 39.51 |
| AT1G05540.1 | Thale cress | mitochondrion | 35.38 | 37.6 |
| AT1G30170.1 | Thale cress | mitochondrion | 33.33 | 35.52 |
| AT1G30160.2 | Thale cress | mitochondrion | 31.79 | 33.88 |
| AT4G16080.1 | Thale cress | mitochondrion | 28.46 | 31.36 |
| AT5G55440.1 | Thale cress | mitochondrion | 29.23 | 31.23 |
| AT2G45940.2 | Thale cress | cytosol | 28.72 | 30.68 |
| AT1G05550.3 | Thale cress | cytosol | 29.23 | 29.61 |
| AT4G16090.1 | Thale cress | mitochondrion | 19.49 | 28.36 |
| AT5G53790.1 | Thale cress | cytosol | 27.18 | 27.89 |
| AT5G03390.1 | Thale cress | mitochondrion | 25.64 | 26.81 |
| AT5G53780.1 | Thale cress | cytosol | 25.13 | 26.06 |
| AT1G68960.1 | Thale cress | mitochondrion | 24.36 | 25.27 |
| AT2G45930.1 | Thale cress | mitochondrion | 14.36 | 23.43 |
Protein Annotations
| ArrayExpress:AT4G25920 | EMBL:AY142499 | EnsemblPlants:AT4G25920.1 | EnsemblPlantsGene:AT4G25920 | EntrezGene:828698 | GO:GO:0005575 |
| InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 | ProteinID:AEE85133.1 | RefSeq:AT4G25920 |
| RefSeq:AT4G25920-TAIR-G | RefSeq:NP_194322.2 | TAIR:AT4G25920 | TAIR:AT4G25920.1 | Unigene:At.32222 | UniParc:UPI00000ADA35 |
| UniProt:Q8H1S2 | MapMan:35.2 | : | : | : | : |
Description
Uncharacterized protein At4g25920 [Source:UniProtKB/TrEMBL;Acc:Q8H1S2]
Coordinates
chr4:+:13165475..13166872
Molecular Weight (calculated)
43979.7 Da
IEP (calculated)
5.725
GRAVY (calculated)
-0.257
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKLIINRIF KPSVCKNFLR HANVRLFSSA THTSTKVNQP FSSKPAFPFL LIDYILNNPN SSSDGRVTTN VYGNEKEVLI KDKDLKEEVC DAMTVGFSRD
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.