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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27327 Canola cytosol 24.93 52.84
CDX95813 Canola mitochondrion 43.16 51.11
CDY23447 Canola mitochondrion 25.74 48.98
CDY65207 Canola mitochondrion 41.29 47.83
Bra039286.1-P Field mustard mitochondrion 43.16 46.4
AT1G68960.1 Thale cress mitochondrion 40.75 40.43
AT5G67040.1 Thale cress mitochondrion 16.09 36.36
AT1G30170.1 Thale cress mitochondrion 31.37 31.97
AT1G05540.1 Thale cress mitochondrion 31.37 31.88
AT5G55440.1 Thale cress mitochondrion 28.69 29.32
AT5G53790.1 Thale cress cytosol 29.76 29.21
AT4G16090.1 Thale cress mitochondrion 20.64 28.73
AT1G05550.3 Thale cress cytosol 29.22 28.31
AT4G25930.1 Thale cress mitochondrion 27.35 27.79
AT5G46140.1 Thale cress cytosol 21.45 27.68
AT1G30160.2 Thale cress mitochondrion 26.81 27.32
AT5G53780.1 Thale cress cytosol 27.08 26.86
AT2G45940.2 Thale cress cytosol 26.27 26.85
AT4G16080.1 Thale cress mitochondrion 25.2 26.55
AT4G25920.1 Thale cress mitochondrion, plastid 26.81 25.64
AT2G45930.1 Thale cress mitochondrion 16.09 25.1
AT5G46130.1 Thale cress mitochondrion 25.2 25.0
AT4G14260.1 Thale cress nucleus 24.93 24.54
Protein Annotations
MapMan:35.2EntrezGene:831852ProteinID:AED90596.1ArrayExpress:AT5G03390EnsemblPlantsGene:AT5G03390RefSeq:AT5G03390
TAIR:AT5G03390RefSeq:AT5G03390-TAIR-GEnsemblPlants:AT5G03390.1TAIR:AT5G03390.1EMBL:AY140024Unigene:At.27840
EMBL:BT008454ProteinID:CAB83296.1InterPro:DUF295GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0009507GO:GO:0009536RefSeq:NP_195959.1PFAM:PF03478PO:PO:0000037
PO:PO:0000293PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0025022PANTHER:PTHR31681
PANTHER:PTHR31681:SF3UniProt:Q9LZF0UniParc:UPI00000A1ECB:::
Description
At5g03390 [Source:UniProtKB/TrEMBL;Acc:Q9LZF0]
Coordinates
chr5:+:834859..836751
Molecular Weight (calculated)
42142.1 Da
IEP (calculated)
8.577
GRAVY (calculated)
-0.344
Length
373 amino acids
Sequence
(BLAST)
001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.