Factsheet for Bra039286.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65207	Canola	mitochondrion	87.32	94.1
AT5G03390.1	Thale cress	mitochondrion	46.4	43.16
Bra004352.1-P	Field mustard	mitochondrion	38.9	36.29
Bra015434.1-P	Field mustard	cytosol	34.29	34.8
Bra020431.1-P	Field mustard	mitochondrion	35.73	34.35
Bra030615.1-P	Field mustard	mitochondrion	33.14	31.77
Bra010793.1-P	Field mustard	mitochondrion	33.14	31.42
Bra040901.1-P	Field mustard	mitochondrion	31.99	30.66
Bra010792.1-P	Field mustard	cytosol	15.56	30.51
Bra030614.1-P	Field mustard	mitochondrion	30.26	29.75
Bra010846.1-P	Field mustard	mitochondrion	31.41	29.3
Bra015433.1-P	Field mustard	mitochondrion	30.84	29.08
Bra000406.1-P	Field mustard	cytosol	29.97	28.73
Bra032294.1-P	Field mustard	cytosol	26.8	28.7
Bra022669.1-P	Field mustard	cytosol	30.55	28.42
Bra010791.1-P	Field mustard	mitochondrion	28.82	28.09
Bra000405.1-P	Field mustard	plastid	30.84	27.79
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	26.51	24.08
Bra033734.1-P	Field mustard	cytosol	25.65	22.94
Bra017579.1-P	Field mustard	cytosol	18.44	22.38

Protein Annotations

EnsemblPlants:Bra039286.1	EnsemblPlants:Bra039286.1-P	EnsemblPlantsGene:Bra039286	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI000254462D	UniProt:M4FDW5	MapMan:35.2	:	:

Description

AT1G68960 (E=3e-063) | unknown protein

Coordinates

chrA04:+:18742704..18744018

Molecular Weight (calculated)

38695.5 Da

IEP (calculated)

8.591

GRAVY (calculated)

-0.136

Length

347 amino acids

Sequence
(BLAST)

001: MFLLVGGTRK LRSFSTAAAQ PYLLVREREV TLKSSSERVV TLNLLDPCKL EMVKIPGKTL PTEVAKSLRI GSSKGWVAVT DLQNSKLRLT NLFNPCASSP
101: TTITLPPLDG CYRGSVARVS KVSLSASPNQ RDCVVAAKLF APLVSLCRPG DSEWTHIETP NNFFTSAVMH SMRDQKFYLH SPHTAPTDLI KTCSDFPPVS
201: PYRRFYFSDI PKTTQDLYQS SIFRTQYLVE SPSGDSFIVI WCMAGGKMEK ETSRLMCETK GFMVFKQDHG KKLCSYTQDI GDLCIFLGKN ESFCVSATKY
301: PGLNPNSVYF EGSETGFGFY QLSSNTVHDL THLAPFSAFY LWLAPLE

Best Arabidopsis Sequence Match ( AT5G03390.1 )
(BLAST)

001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ

Arabidopsis Description

At5g03390 [Source:UniProtKB/TrEMBL;Acc:Q9LZF0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.