Factsheet for Bra010846.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
peroxisome 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90173	Canola	mitochondrion	97.04	97.04
Bra015434.1-P	Field mustard	cytosol	49.73	54.09
Bra030614.1-P	Field mustard	mitochondrion	46.24	48.73
Bra010793.1-P	Field mustard	mitochondrion	47.04	47.81
Bra032294.1-P	Field mustard	cytosol	40.86	46.91
Bra010792.1-P	Field mustard	cytosol	22.04	46.33
Bra015433.1-P	Field mustard	mitochondrion	45.16	45.65
Bra030615.1-P	Field mustard	mitochondrion	43.82	45.03
Bra010791.1-P	Field mustard	mitochondrion	40.86	42.7
Bra000405.1-P	Field mustard	plastid	40.86	39.48
Bra000406.1-P	Field mustard	cytosol	36.29	37.29
Bra020431.1-P	Field mustard	mitochondrion	34.14	35.18
Bra040901.1-P	Field mustard	mitochondrion	32.26	33.15
Bra039286.1-P	Field mustard	mitochondrion	29.3	31.41
Bra033734.1-P	Field mustard	cytosol	32.26	30.93
Bra004352.1-P	Field mustard	mitochondrion	30.38	30.38
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.11	29.32
Bra022669.1-P	Field mustard	cytosol	28.23	28.15
Bra017579.1-P	Field mustard	cytosol	20.16	26.22

Protein Annotations

EnsemblPlants:Bra010846.1	EnsemblPlants:Bra010846.1-P	EnsemblPlantsGene:Bra010846	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI00025454B7	UniProt:M4D2Z3	MapMan:35.2	:	:

Description

AT1G05540 (E=1e-089) | unknown protein

Coordinates

chrA08:-:16765324..16766737

Molecular Weight (calculated)

42579.8 Da

IEP (calculated)

7.807

GRAVY (calculated)

-0.332

Length

372 amino acids

Sequence
(BLAST)

001: MSRRFIKLSP WSHALIHKRR FRLFSSSFTT PYLLLGTTLK NDLPDGSDVR DVLLFDPTKE EMLTVPNITF PEEVAGSRQI GSARGWGIFS NDHDRSLCIS
101: DLYSSLGPKS TLTMIPMPSL VAVYSNQTNA VWNVAMSSSP SDQDCVVAIK LLDRQLSLCR PHSNMRWTNV GEILAENNLQ KLENSTLMYS KRERRFYLPG
201: PGGNSLYSWD LHLKKNKVPS FHELMFRDLP ELDDSEWKLL GWCCRTEHLV ELASSGERFL VKWYAQRFFS SSHEGSNYTT RRFMVFREKK MTEGRYMHYT
301: EDIGDVCIFI SMSEAFCVEA SSCSGLKPNS IYFIGHGFGI YNVADTTIHH FQAPEGAPTS FKDPYWLPPS RI

Best Arabidopsis Sequence Match ( AT1G05550.3 )
(BLAST)

001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI

Arabidopsis Description

Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.