Factsheet for Bra010793.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 7
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90231	Canola	mitochondrion	100.0	100.0
AT1G30170.1	Thale cress	mitochondrion	77.6	77.6
Bra015434.1-P	Field mustard	cytosol	47.81	51.17
Bra030614.1-P	Field mustard	mitochondrion	47.27	49.01
Bra032294.1-P	Field mustard	cytosol	43.17	48.77
Bra010791.1-P	Field mustard	mitochondrion	45.9	47.19
Bra010846.1-P	Field mustard	mitochondrion	47.81	47.04
Bra030615.1-P	Field mustard	mitochondrion	45.63	46.13
Bra010792.1-P	Field mustard	cytosol	22.13	45.76
Bra015433.1-P	Field mustard	mitochondrion	44.54	44.29
Bra000405.1-P	Field mustard	plastid	43.44	41.3
Bra000406.1-P	Field mustard	cytosol	38.8	39.23
Bra020431.1-P	Field mustard	mitochondrion	35.52	36.01
Bra040901.1-P	Field mustard	mitochondrion	35.25	35.64
Bra039286.1-P	Field mustard	mitochondrion	31.42	33.14
Bra033734.1-P	Field mustard	cytosol	34.97	32.99
Bra022669.1-P	Field mustard	cytosol	33.33	32.71
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.69	27.49
Bra004352.1-P	Field mustard	mitochondrion	27.87	27.42
Bra017579.1-P	Field mustard	cytosol	20.22	25.87

Protein Annotations

EnsemblPlants:Bra010793.1	EnsemblPlants:Bra010793.1-P	EnsemblPlantsGene:Bra010793	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	SEG:seg	UniParc:UPI00025470C7	UniProt:M4D2U0	MapMan:35.2	:

Description

AT1G30170 (E=1e-165) | unknown protein

Coordinates

chrA08:+:16471768..16473045

Molecular Weight (calculated)

41464.4 Da

IEP (calculated)

6.966

GRAVY (calculated)

-0.359

Length

366 amino acids

Sequence
(BLAST)

001: MSRLLSKLSP IMHRRSMSVR SFSSSMTGPY MLRSLKVNPS PGGVNIGKVL VFDPAKEELL ELTDKAIPEE IIMTKATGAS KGWGFFSDPQ DSCILITDVM
101: NPWSCKSNPK IFTLPPLTPL PSCQTDVIWS VAMSSCPDDD QDWVVGIKSL GDQLSFCRPR RDLRWTKITT PPDYFPTSNL MYSKKDRKFY LTGPGGHHLL
201: SYDLHFKKSD KPEFHELEFR NFPESFKYDS EQSELFPSSC RTERLVESAS GDERFLVKWY AKGCLDSRKI SYETQRIMVF REEETTDGRF MCYTDDIGDM
301: CIFVSKGEAF CIPASSFPGL KPNSIYFIGF GVGVYDLTTR TSSSFQAPTG ALNYPWAPYW FPPSSS

Best Arabidopsis Sequence Match ( AT1G30170.1 )
(BLAST)

001: MSRLLSKLSP LIHKRSVRSF SSSTTGPYLQ LSLSAKPSSE GVVNIGEIVL YDPAKQELLN LTDKPIPEEI VTAKWIGASK GWAFFLDTQD RCVLITDSLN
101: PWACKSNPKL LTLPPLNPLF SCQTDVIWNV AMSSCPDDDE DWVVGIKSLG DQVSFCRPRR DLRWTKFQTP SDHFPTSNLT YSKRDRKFYL PGPGGHHLLS
201: YDLDFNKADQ PEFHELQFRN FPESLKYDSE LSELFPSSCR TERFVESPSG DERFLVKWYA KGCLASSSKI TYETQRFMVF REEETTEERF MCYTDDIGDL
301: CIFVSKSEAF CVPASSYPGL KPNSIYFVGF GLGIYDLTTR NVSIFRAPKG ALNQIVSPYW FPPASS

Arabidopsis Description

Uncharacterized protein T2H7.3 [Source:UniProtKB/TrEMBL;Acc:Q9C6Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.