Factsheet for Bra033734.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48999	Canola	cytosol	98.97	98.97
Bra010792.1-P	Field mustard	cytosol	18.56	40.68
Bra015434.1-P	Field mustard	cytosol	31.19	35.38
Bra010793.1-P	Field mustard	mitochondrion	32.99	34.97
Bra032294.1-P	Field mustard	cytosol	28.09	33.64
Bra015433.1-P	Field mustard	mitochondrion	31.19	32.88
Bra000406.1-P	Field mustard	cytosol	30.41	32.6
Bra010846.1-P	Field mustard	mitochondrion	30.93	32.26
Bra010791.1-P	Field mustard	mitochondrion	29.38	32.02
Bra030615.1-P	Field mustard	mitochondrion	28.87	30.94
Bra030614.1-P	Field mustard	mitochondrion	28.09	30.88
Bra000405.1-P	Field mustard	plastid	29.9	30.13
Bra022669.1-P	Field mustard	cytosol	26.29	27.35
Bra020431.1-P	Field mustard	mitochondrion	25.26	27.15
Bra040901.1-P	Field mustard	mitochondrion	25.26	27.07
Bra017579.1-P	Field mustard	cytosol	19.85	26.92
Bra039286.1-P	Field mustard	mitochondrion	22.94	25.65
Bra004352.1-P	Field mustard	mitochondrion	22.16	23.12
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.68	23.04

Protein Annotations

EnsemblPlants:Bra033734.1	EnsemblPlants:Bra033734.1-P	EnsemblPlantsGene:Bra033734	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	SEG:seg	UniParc:UPI000253F6A6	UniProt:M4EY43	MapMan:35.2	:

Description

AT4G14260 (E=3e-080) | unknown protein

Coordinates

chrA06:-:25346691..25347934

Molecular Weight (calculated)

44526.3 Da

IEP (calculated)

4.591

GRAVY (calculated)

-0.496

Length

388 amino acids

Sequence
(BLAST)

001: MFSSSTPTFP FMLIDYLTNF SSVEDDGPVT KWYGSSPPNC YNQKEILIRD LKLREEVLEA MTSGFSRNQS FGFYDYYQSD SGDNPPILLK HKPSNPELTE
101: VSAQLPPLPC GTKIQNIAMS SFSNRRRDWA VCVKLPGSQL SLCRPFAFGQ FKWINIKPMP ESISSFSSIM FSKKDQRFYI PSPGGNHLCS LDLNFKEGDM
201: PRFLRIGFED YPKSVVSELE ELNSCSRTDH IVESPTGELF YIKWYGEEYE GEDLDRDENY NDVVRSLTHK TKKFMVFREK ETGYAEEKKN EVIIYTEEDD
301: KTMTYTEDIG DLCIFVGHSQ AYCVPASSSP GLKPNCIYFV GYSFGVYDIT TKTCTTFFTR DADEEDSEIA PLRRLDFPYW PPPFPISC

Best Arabidopsis Sequence Match ( AT4G25920.1 )
(BLAST)

001: MSKLIINRIF KPSVCKNFLR HANVRLFSSA THTSTKVNQP FSSKPAFPFL LIDYILNNPN SSSDGRVTTN VYGNEKEVLI KDKDLKEEVC DAMTVGFSRD
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN

Arabidopsis Description

Uncharacterized protein At4g25920 [Source:UniProtKB/TrEMBL;Acc:Q8H1S2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.