Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033734.1-P | Field mustard | cytosol | 98.97 | 98.97 |
| CDX94769 | Canola | cytosol | 81.44 | 84.72 |
| CDY65427 | Canola | cytosol | 27.06 | 54.4 |
| CDX86571 | Canola | cytosol | 11.08 | 50.0 |
| CDX99886 | Canola | cytosol | 23.2 | 41.28 |
| CDY53420 | Canola | cytosol | 34.02 | 39.29 |
| CDX90231 | Canola | mitochondrion | 33.25 | 35.25 |
| CDY57749 | Canola | mitochondrion | 31.96 | 35.23 |
| CDY51469 | Canola | mitochondrion | 32.73 | 34.7 |
| CDY03244 | Canola | cytosol | 22.68 | 34.51 |
| CDY10120 | Canola | mitochondrion | 29.12 | 33.43 |
| CDY50787 | Canola | cytosol | 27.84 | 33.33 |
| CDX98187 | Canola | mitochondrion | 31.19 | 33.15 |
| CDY10119 | Canola | mitochondrion | 30.93 | 32.61 |
| CDY47276 | Canola | mitochondrion | 30.93 | 32.61 |
| CDX90232 | Canola | mitochondrion | 29.64 | 32.3 |
| CDY43323 | Canola | mitochondrion | 30.93 | 32.26 |
| CDY47275 | Canola | cytosol | 31.7 | 32.03 |
| CDY57750 | Canola | plastid | 30.67 | 31.9 |
| CDY59993 | Canola | cytosol, plastid | 22.42 | 31.87 |
| CDX90173 | Canola | mitochondrion | 30.41 | 31.72 |
| CDY51468 | Canola | mitochondrion | 29.38 | 31.67 |
| CDX95667 | Canola | mitochondrion, plastid | 30.67 | 31.23 |
| CDX83387 | Canola | cytosol | 29.12 | 31.22 |
| CDX99797 | Canola | plastid | 29.9 | 31.02 |
| CDX99796 | Canola | mitochondrion | 31.7 | 30.98 |
| CDY27327 | Canola | cytosol | 13.92 | 30.68 |
| CDX86573 | Canola | mitochondrion | 28.61 | 30.58 |
| CDX99887 | Canola | extracellular, plasma membrane | 27.84 | 30.42 |
| CDX83388 | Canola | plastid | 29.9 | 30.29 |
| CDX95668 | Canola | mitochondrion | 29.64 | 30.1 |
| CDY15545 | Canola | mitochondrion | 25.77 | 30.03 |
| CDY15546 | Canola | plastid | 28.09 | 27.88 |
| CDX95813 | Canola | mitochondrion | 22.16 | 27.3 |
| CDY28820 | Canola | cytosol | 26.03 | 27.08 |
| CDY65207 | Canola | mitochondrion | 22.16 | 26.71 |
| CDY35144 | Canola | mitochondrion | 21.65 | 26.58 |
| CDY23447 | Canola | mitochondrion | 13.4 | 26.53 |
| CDY02744 | Canola | mitochondrion | 15.21 | 25.32 |
| CDY71779 | Canola | mitochondrion | 22.16 | 24.43 |
| CDX95970 | Canola | mitochondrion | 22.68 | 23.78 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 22.42 | 22.77 |
| CDY33565 | Canola | plastid | 22.16 | 22.63 |
| CDX92018 | Canola | mitochondrion | 22.68 | 22.51 |
| CDX92019 | Canola | mitochondrion | 22.16 | 21.55 |
| CDX86572 | Canola | mitochondrion | 9.54 | 20.9 |
| CDY41583 | Canola | mitochondrion | 11.34 | 19.05 |
| CDY10122 | Canola | mitochondrion | 32.22 | 17.24 |
Protein Annotations
| EnsemblPlants:CDY48999 | EnsemblPlantsGene:GSBRNA2T00092204001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDY48999 | ProteinID:CDY48999.1 | SEG:seg | UniParc:UPI0004EE773A | UniProt:A0A078IHW7 | MapMan:35.2 |
Description
BnaAnng09930DBnaAnng09930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHW7]
Coordinates
chrLK032806:+:4805..6049
Molecular Weight (calculated)
44565.4 Da
IEP (calculated)
4.637
GRAVY (calculated)
-0.507
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSSSTPTFP FMLIDYLTNF SSVEDDGPVT KWYGSSPPNC YNQKEILIRD LKLREEVLEA MTSGFSRNQS FGFYDYYQSD SGDNPHILLK HKPSNPELTE
101: VSAQLPPLPC GTKIQNIAMS SFSNRRKDWA VCVKLPGSQL SLCRPFAFGQ FKWINIKPMP ESISSFSSIM FSKKDQRFYI PSPGGNHLCS LDLNFKEGDM
201: PRFLRIGFED YPKSVVSELE ELNSCSRTDH IVESPTGELF YIKWYGEEYE GEDLDRDENY NDVVRSLTHK TKKFMVFREK ETGYAEEKKN EVIIYTEEDD
301: KTMTYTEDIG DLCIFVGHSQ AYCVPASSSP GLKPNCIYFV GYSFGVYDLT TKTCTTFFTR DADEEDNEIA PLRRLDFPYW PPPFPISC
101: VSAQLPPLPC GTKIQNIAMS SFSNRRKDWA VCVKLPGSQL SLCRPFAFGQ FKWINIKPMP ESISSFSSIM FSKKDQRFYI PSPGGNHLCS LDLNFKEGDM
201: PRFLRIGFED YPKSVVSELE ELNSCSRTDH IVESPTGELF YIKWYGEEYE GEDLDRDENY NDVVRSLTHK TKKFMVFREK ETGYAEEKKN EVIIYTEEDD
301: KTMTYTEDIG DLCIFVGHSQ AYCVPASSSP GLKPNCIYFV GYSFGVYDLT TKTCTTFFTR DADEEDNEIA PLRRLDFPYW PPPFPISC
001: MSKLIINRIF KPSVCKNFLR HANVRLFSSA THTSTKVNQP FSSKPAFPFL LIDYILNNPN SSSDGRVTTN VYGNEKEVLI KDKDLKEEVC DAMTVGFSRD
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN
101: GLRVELCGNH GDVCSPTIFY KPTDPEIEDL TVDLPPLPTG SQIQSLVMSS LPKRDKNWVV VVKLLGSQLS MCRPFGSRKW INIQTKPQNI NPSSSIMFSK
201: KEKKFYVPTP GGNILCYLDP HSEDDDLIDF VELEFDDLPK SVFQELADVS TCSRTDHLVE SPTGQLFLVK WYGEDLEDID NTTLYNVTKK FMVFKEGEKP
301: SCVYTKKMIY TEDIGDLCIF VGHSEAFCVP ASSSPGLKPN CIYFVGYNFG VYDLTTKTCT MFLTKDDNPL RKLEFPYWPP PASFPVLAPN
Arabidopsis Description
Uncharacterized protein At4g25920 [Source:UniProtKB/TrEMBL;Acc:Q8H1S2]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.