Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 4
- plastid 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47276 | Canola | mitochondrion | 92.12 | 92.12 |
| AT1G05540.1 | Thale cress | mitochondrion | 73.1 | 73.3 |
| CDY10120 | Canola | mitochondrion | 52.72 | 57.4 |
| CDY50787 | Canola | cytosol | 48.37 | 54.94 |
| CDX86572 | Canola | mitochondrion | 26.36 | 54.8 |
| CDX86571 | Canola | cytosol | 12.77 | 54.65 |
| CDX99886 | Canola | cytosol | 32.07 | 54.13 |
| CDX99797 | Canola | plastid | 52.99 | 52.14 |
| CDY15546 | Canola | plastid | 55.16 | 51.92 |
| CDY57749 | Canola | mitochondrion | 49.18 | 51.42 |
| CDX86573 | Canola | mitochondrion | 50.54 | 51.24 |
| CDY47275 | Canola | cytosol | 53.26 | 51.04 |
| CDX98187 | Canola | mitochondrion | 48.91 | 49.32 |
| CDX90232 | Canola | mitochondrion | 47.28 | 48.88 |
| CDY15545 | Canola | mitochondrion | 43.75 | 48.35 |
| CDY57750 | Canola | plastid | 48.91 | 48.26 |
| CDY51468 | Canola | mitochondrion | 46.2 | 47.22 |
| CDY43323 | Canola | mitochondrion | 46.47 | 45.97 |
| CDX90173 | Canola | mitochondrion | 45.65 | 45.16 |
| CDY51469 | Canola | mitochondrion | 43.75 | 43.99 |
| CDX90231 | Canola | mitochondrion | 43.75 | 43.99 |
| CDX99796 | Canola | mitochondrion | 46.2 | 42.82 |
| CDX95667 | Canola | mitochondrion, plastid | 44.02 | 42.52 |
| CDX99887 | Canola | extracellular, plasma membrane | 40.49 | 41.97 |
| CDX83388 | Canola | plastid | 43.21 | 41.51 |
| CDY59993 | Canola | cytosol, plastid | 30.16 | 40.66 |
| CDY65427 | Canola | cytosol | 21.2 | 40.41 |
| CDX83387 | Canola | cytosol | 38.32 | 38.95 |
| CDY10122 | Canola | mitochondrion | 75.54 | 38.34 |
| CDX95668 | Canola | mitochondrion | 39.13 | 37.7 |
| CDY02744 | Canola | mitochondrion | 22.83 | 36.05 |
| CDY23447 | Canola | mitochondrion | 17.93 | 33.67 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 34.78 | 33.51 |
| CDX95813 | Canola | mitochondrion | 28.26 | 33.02 |
| CDY27327 | Canola | cytosol | 15.76 | 32.95 |
| CDY28820 | Canola | cytosol | 32.88 | 32.44 |
| CDY65207 | Canola | mitochondrion | 27.99 | 31.99 |
| CDX94769 | Canola | cytosol | 32.34 | 31.9 |
| CDY71779 | Canola | mitochondrion | 30.43 | 31.82 |
| CDY41583 | Canola | mitochondrion | 19.84 | 31.6 |
| CDY33565 | Canola | plastid | 32.07 | 31.05 |
| CDY48999 | Canola | cytosol | 32.61 | 30.93 |
| CDX95970 | Canola | mitochondrion | 30.98 | 30.81 |
| CDY53420 | Canola | cytosol | 27.45 | 30.06 |
| CDX92018 | Canola | mitochondrion | 29.35 | 27.62 |
| CDY03244 | Canola | cytosol | 19.02 | 27.45 |
| CDX92019 | Canola | mitochondrion | 27.45 | 25.31 |
| CDY35144 | Canola | mitochondrion | 20.92 | 24.37 |
Protein Annotations
| EnsemblPlants:CDY10119 | EnsemblPlantsGene:GSBRNA2T00031924001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDY10119 | ProteinID:CDY10119.1 | UniParc:UPI0004EEE7F9 | UniProt:A0A078FAQ8 | MapMan:35.2 | : |
Description
BnaC05g03620DBnaC05g03620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAQ8]
Coordinates
chrLK032001:+:114140..115583
Molecular Weight (calculated)
41833.0 Da
IEP (calculated)
6.124
GRAVY (calculated)
-0.176
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLLFCLSK LSSRNNNVLI HKNSRFLSTS PYLILGVFGD DFRSACGGFL SDILLFDPAK EELLTVRDKT VPVELVCSQV MGASHGWGFF ADHNSVCISD
101: TFSPLASKSD SKVITLPPIT SMIYGQTEVV WNVAMSSSSP YHQDNEDGEC VVAIKFLGNH LTMCRPGRRD LGWTNKLIPF VCFENSNLMY SKRDQRFSLP
201: APGGNYLCSW DLHFENEPKF TELVFRNIPQ LPQSEWEMMD SCFKEDHWVE SPCGQSFLVK WYSHVPSIRC KETMVMVFRE DQDTNERTKN MSYTEDIGDL
301: CIFLSKSEPF CVVASSCPGL KPNSIYLMGH SFAVYDITTK TARHFERPKG LPESLTHFLP YWLAPFSM
101: TFSPLASKSD SKVITLPPIT SMIYGQTEVV WNVAMSSSSP YHQDNEDGEC VVAIKFLGNH LTMCRPGRRD LGWTNKLIPF VCFENSNLMY SKRDQRFSLP
201: APGGNYLCSW DLHFENEPKF TELVFRNIPQ LPQSEWEMMD SCFKEDHWVE SPCGQSFLVK WYSHVPSIRC KETMVMVFRE DQDTNERTKN MSYTEDIGDL
301: CIFLSKSEPF CVVASSCPGL KPNSIYLMGH SFAVYDITTK TARHFERPKG LPESLTHFLP YWLAPFSM
001: MSQLLFRLSK LSSRNNELIH KSVRLFSTSP YLTLGSVVED LPEEDGSYIG DILLFDPAKE ELVTVRDKTI PEKLVNSRVV GASHGWTFFS DRCNHNSVCI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI
Arabidopsis Description
T25N20.19 [Source:UniProtKB/TrEMBL;Acc:Q9ZVY4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.