Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015434.1-P | Field mustard | cytosol | 87.76 | 98.54 |
| CDY10120 | Canola | mitochondrion | 80.99 | 92.01 |
| CDX86571 | Canola | cytosol | 16.67 | 74.42 |
| CDX86573 | Canola | mitochondrion | 64.58 | 68.32 |
| CDY15545 | Canola | mitochondrion | 55.99 | 64.56 |
| CDX86572 | Canola | mitochondrion | 28.12 | 61.02 |
| CDY10119 | Canola | mitochondrion | 51.04 | 53.26 |
| CDY47276 | Canola | mitochondrion | 50.52 | 52.72 |
| CDY43323 | Canola | mitochondrion | 50.26 | 51.88 |
| CDX90173 | Canola | mitochondrion | 50.26 | 51.88 |
| CDY57750 | Canola | plastid | 49.48 | 50.94 |
| CDY51469 | Canola | mitochondrion | 46.88 | 49.18 |
| CDY50787 | Canola | cytosol | 41.41 | 49.07 |
| CDX90231 | Canola | mitochondrion | 46.61 | 48.91 |
| CDY57749 | Canola | mitochondrion | 44.79 | 48.86 |
| CDX99796 | Canola | mitochondrion | 50.0 | 48.36 |
| CDX99797 | Canola | plastid | 46.61 | 47.86 |
| CDX99886 | Canola | cytosol | 26.3 | 46.33 |
| CDX98187 | Canola | mitochondrion | 43.23 | 45.48 |
| CDX99887 | Canola | extracellular, plasma membrane | 41.41 | 44.79 |
| CDX90232 | Canola | mitochondrion | 40.36 | 43.54 |
| CDY15546 | Canola | plastid | 43.75 | 42.97 |
| CDX83387 | Canola | cytosol | 40.1 | 42.54 |
| CDY51468 | Canola | mitochondrion | 39.84 | 42.5 |
| CDX95668 | Canola | mitochondrion | 41.41 | 41.62 |
| CDX95667 | Canola | mitochondrion, plastid | 41.15 | 41.47 |
| CDX83388 | Canola | plastid | 40.36 | 40.47 |
| CDY65427 | Canola | cytosol | 20.05 | 39.9 |
| CDY59993 | Canola | cytosol, plastid | 27.86 | 39.19 |
| CDX95813 | Canola | mitochondrion | 28.91 | 35.24 |
| CDY65207 | Canola | mitochondrion | 29.17 | 34.78 |
| CDY02744 | Canola | mitochondrion | 21.09 | 34.76 |
| CDY27327 | Canola | cytosol | 15.36 | 33.52 |
| CDY10122 | Canola | mitochondrion | 61.72 | 32.69 |
| CDX94769 | Canola | cytosol | 31.25 | 32.17 |
| CDY23447 | Canola | mitochondrion | 16.41 | 32.14 |
| CDY48999 | Canola | cytosol | 32.03 | 31.7 |
| CDY28820 | Canola | cytosol | 30.21 | 31.1 |
| CDY41583 | Canola | mitochondrion | 18.49 | 30.74 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 30.47 | 30.63 |
| CDY03244 | Canola | cytosol | 20.31 | 30.59 |
| CDY71779 | Canola | mitochondrion | 27.86 | 30.4 |
| CDX95970 | Canola | mitochondrion | 28.65 | 29.73 |
| CDY33565 | Canola | plastid | 29.17 | 29.47 |
| CDY53420 | Canola | cytosol | 25.78 | 29.46 |
| CDY35144 | Canola | mitochondrion | 23.18 | 28.16 |
| CDX92018 | Canola | mitochondrion | 26.82 | 26.34 |
| CDX92019 | Canola | mitochondrion | 23.96 | 23.06 |
Protein Annotations
| EnsemblPlants:CDY47275 | EnsemblPlantsGene:GSBRNA2T00087083001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDY47275 | ProteinID:CDY47275.1 | UniParc:UPI0004EF41BB | UniProt:A0A078I8N0 | MapMan:35.2 | : |
Description
BnaA10g03710DBnaA10g03710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8N0]
Coordinates
chrLK032705:-:73748..77008
Molecular Weight (calculated)
43818.2 Da
IEP (calculated)
5.579
GRAVY (calculated)
-0.280
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRTEYKSRE ISKVCFIWWG LEEYTMSQLL FRLSKLSSRN NNMIHESARL FSTSPYLTLG TRVKEVLPGG CKIADVLLFD PAEEELVTVP DKTVPKELMD
101: EEMVGASHGW GVFCARHDRS VRISDLYNPL ASKSNPTMIT LPRLTALSSN YCNVAMTSSP HLEDCVVAIK FVGDHLSLCR PGRDLEWTNI LTPPSCLENS
201: NLMYSKRDQK FYLPAPGGKY LFSYHLHSKE EDFPEVQEVV YRGHPELDQS EWELLSSCTR TEHLVESPFS DERFLVKWYA HGFYSSVLER IDHITKRFMV
301: FREEETTEGS IMCYTEDIGD MCIFLANSEA FCVPASSCTG LKPNSIYHMG RGLGFYDLTT GNPHQYLAPD GVPTLSYWLP PFSI
101: EEMVGASHGW GVFCARHDRS VRISDLYNPL ASKSNPTMIT LPRLTALSSN YCNVAMTSSP HLEDCVVAIK FVGDHLSLCR PGRDLEWTNI LTPPSCLENS
201: NLMYSKRDQK FYLPAPGGKY LFSYHLHSKE EDFPEVQEVV YRGHPELDQS EWELLSSCTR TEHLVESPFS DERFLVKWYA HGFYSSVLER IDHITKRFMV
301: FREEETTEGS IMCYTEDIGD MCIFLANSEA FCVPASSCTG LKPNSIYHMG RGLGFYDLTT GNPHQYLAPD GVPTLSYWLP PFSI
001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI
Arabidopsis Description
Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.