Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86571 | Canola | cytosol | 17.43 | 44.19 |
| AT1G30160.2 | Thale cress | mitochondrion | 69.72 | 41.53 |
| CDY51468 | Canola | mitochondrion | 66.97 | 40.56 |
| CDX90232 | Canola | mitochondrion | 65.6 | 40.17 |
| CDY50787 | Canola | cytosol | 54.13 | 36.42 |
| CDY65427 | Canola | cytosol | 30.28 | 34.2 |
| CDY10119 | Canola | mitochondrion | 54.13 | 32.07 |
| CDY47276 | Canola | mitochondrion | 53.67 | 31.79 |
| CDX99797 | Canola | plastid | 53.67 | 31.28 |
| CDY59993 | Canola | cytosol, plastid | 38.53 | 30.77 |
| CDX90231 | Canola | mitochondrion | 50.0 | 29.78 |
| CDY57749 | Canola | mitochondrion | 47.71 | 29.55 |
| CDY51469 | Canola | mitochondrion | 49.54 | 29.51 |
| CDY15546 | Canola | plastid | 52.75 | 29.41 |
| CDY10120 | Canola | mitochondrion | 44.04 | 28.4 |
| CDX98187 | Canola | mitochondrion | 45.87 | 27.4 |
| CDY27327 | Canola | cytosol | 22.02 | 27.27 |
| CDY43323 | Canola | mitochondrion | 46.33 | 27.15 |
| CDY57750 | Canola | plastid | 46.33 | 27.08 |
| CDX90173 | Canola | mitochondrion | 45.41 | 26.61 |
| CDY47275 | Canola | cytosol | 46.33 | 26.3 |
| CDX99796 | Canola | mitochondrion | 45.87 | 25.19 |
| CDX86573 | Canola | mitochondrion | 41.74 | 25.07 |
| CDX99887 | Canola | extracellular, plasma membrane | 39.91 | 24.51 |
| CDX94769 | Canola | cytosol | 40.37 | 23.59 |
| CDY15545 | Canola | mitochondrion | 35.78 | 23.42 |
| CDY48999 | Canola | cytosol | 41.28 | 23.2 |
| CDX95667 | Canola | mitochondrion, plastid | 38.99 | 22.31 |
| CDX83388 | Canola | plastid | 38.99 | 22.19 |
| CDX83387 | Canola | cytosol | 36.7 | 22.1 |
| CDX95668 | Canola | mitochondrion | 37.16 | 21.2 |
| CDY28820 | Canola | cytosol | 34.86 | 20.38 |
| CDY53420 | Canola | cytosol | 31.19 | 20.24 |
| CDY03244 | Canola | cytosol | 23.39 | 20.0 |
| CDX95813 | Canola | mitochondrion | 28.44 | 19.68 |
| CDY65207 | Canola | mitochondrion | 28.9 | 19.57 |
| CDY35144 | Canola | mitochondrion | 26.15 | 18.04 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 31.19 | 17.8 |
| CDY71779 | Canola | mitochondrion | 27.06 | 16.76 |
| CDY10122 | Canola | mitochondrion | 54.13 | 16.28 |
| CDX95970 | Canola | mitochondrion | 27.52 | 16.22 |
| CDY23447 | Canola | mitochondrion | 14.22 | 15.82 |
| CDY33565 | Canola | plastid | 27.52 | 15.79 |
| CDX92018 | Canola | mitochondrion | 27.06 | 15.09 |
| CDY02744 | Canola | mitochondrion | 15.14 | 14.16 |
| CDX86572 | Canola | mitochondrion | 11.01 | 13.56 |
| CDX92019 | Canola | mitochondrion | 24.31 | 13.28 |
| CDY41583 | Canola | mitochondrion | 12.84 | 12.12 |
Protein Annotations
| EnsemblPlants:CDX99886 | EnsemblPlantsGene:GSBRNA2T00108658001 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | ProteinID:CDX99886 | ProteinID:CDX99886.1 |
| SEG:seg | UniParc:UPI0004EE7EB1 | MapMan:35.2 | : | : | : |
Description
BnaC05g23080D
Coordinates
chrLK031914:+:1152260..1153006
Molecular Weight (calculated)
25613.6 Da
IEP (calculated)
8.382
GRAVY (calculated)
-0.514
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: METTGVKFLG NQLSFCRPHC DLRWTNIRTP FESWDRSNLI YSKKDERFYL LAPGGKYLCS WDLNFKKDNK PKFLELVLHN IPNLPSSLWK RLDSLCREDH
101: WVESPSGESF LVKWYKFAHV LRIHTSRVMV FREEDTICGK RNMRYTEDIG DLCIFISKGE DICVEARSNK LKPNSILLNG RLFATINNTN NTFGCYEYPE
201: GTPDKIPYSP YWFPPFSS
101: WVESPSGESF LVKWYKFAHV LRIHTSRVMV FREEDTICGK RNMRYTEDIG DLCIFISKGE DICVEARSNK LKPNSILLNG RLFATINNTN NTFGCYEYPE
201: GTPDKIPYSP YWFPPFSS
001: MSQLLFRLSK LSSRNNELIH KSVRLFSTSP YLTLGSVVED LPEEDGSYIG DILLFDPAKE ELVTVRDKTI PEKLVNSRVV GASHGWTFFS DRCNHNSVCI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI
Arabidopsis Description
T25N20.19 [Source:UniProtKB/TrEMBL;Acc:Q9ZVY4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.