CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33565	Canola	plastid	87.57	85.26
AT1G68960.1	Thale cress	mitochondrion	73.51	72.34
CDY71779	Canola	mitochondrion	55.41	58.24
CDY41583	Canola	mitochondrion	32.97	52.81
CDY23447	Canola	mitochondrion	21.62	40.82
CDX95813	Canola	mitochondrion	33.78	39.68
CDY65207	Canola	mitochondrion	34.32	39.44
CDY27327	Canola	cytosol	18.38	38.64
CDX86571	Canola	cytosol	8.38	36.05
CDY59993	Canola	cytosol, plastid	25.14	34.07
CDX86572	Canola	mitochondrion	15.68	32.77
CDY02744	Canola	mitochondrion	20.27	32.19
CDY43323	Canola	mitochondrion	32.16	31.99
CDY10120	Canola	mitochondrion	29.19	31.95
CDY57750	Canola	plastid	31.62	31.37
CDY47276	Canola	mitochondrion	30.81	30.98
CDY10119	Canola	mitochondrion	30.81	30.98
CDX90173	Canola	mitochondrion	31.08	30.91
CDX86573	Canola	mitochondrion	30.0	30.58
CDY28820	Canola	cytosol	30.0	29.76
CDY15545	Canola	mitochondrion	26.76	29.73
CDX92018	Canola	mitochondrion	31.08	29.41
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.27	29.32
CDY47275	Canola	cytosol	29.73	28.65
CDX92019	Canola	mitochondrion	30.81	28.57
CDX83387	Canola	cytosol	27.57	28.18
CDX90232	Canola	mitochondrion	27.03	28.09
CDX83388	Canola	plastid	28.92	27.94
CDY57749	Canola	mitochondrion	26.49	27.84
CDX95667	Canola	mitochondrion, plastid	28.65	27.82
CDY51468	Canola	mitochondrion	27.03	27.78
CDX90231	Canola	mitochondrion	27.3	27.6
CDX99797	Canola	plastid	27.84	27.54
CDX99886	Canola	cytosol	16.22	27.52
CDY65427	Canola	cytosol	14.32	27.46
CDY51469	Canola	mitochondrion	27.03	27.32
CDX99796	Canola	mitochondrion	29.19	27.2
CDY50787	Canola	cytosol	23.24	26.54
CDX95668	Canola	mitochondrion	26.76	25.92
CDY03244	Canola	cytosol	17.3	25.1
CDY15546	Canola	plastid	26.49	25.06
CDX98187	Canola	mitochondrion	24.59	24.93
CDX99887	Canola	extracellular, plasma membrane	23.51	24.51
CDY53420	Canola	cytosol	21.08	23.21
CDX94769	Canola	cytosol	23.24	23.06
CDY48999	Canola	cytosol	23.78	22.68
CDY35144	Canola	mitochondrion	18.38	21.52
CDY10122	Canola	mitochondrion	32.7	16.69

Protein Annotations

EnsemblPlants:CDX95970	EnsemblPlantsGene:GSBRNA2T00101990001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDX95970	ProteinID:CDX95970.1	SEG:seg	UniParc:UPI0004EE0B81	MapMan:35.2	:

Description

BnaA07g27610D

Coordinates

chrLK031892:-:348844..350282

Molecular Weight (calculated)

41515.7 Da

IEP (calculated)

6.834

GRAVY (calculated)

-0.435

Length

370 amino acids

Sequence
(BLAST)

001: MSHLFSRVSK KLSSFSSRSL SFRRSNFSTV TTPYLLLGRD VVGDSPCGGK LVNFNLYDPK SQKHVKIENQ TLTKELNESK WIGSSRGWLA STNKNDSTVH
101: LFNPSKKKTI SLPPLTRDKF EHLVNVSVSS SDCCVVAVKF YGSRVSLCRL GDSEWTRVDV PCPSFHSSTI IYSERDERFY LNNCNPDYTG PTDFTPTSNP
201: GLLTPVSGYK RFPFFNFLDE MPEEEEETCL SRFKIQQQLV QSSSGQSFIV CWFVERFNDK GEAAPWGDTS YNNNMEGLCK KTHKIMVFRQ DEEQGLGPYT
301: DDIGDLCIFL GDNEAFCLSA KDYSGLNPNS VYFAGHGSGF GICDLASRTI SYLSDSPPPG RMFWIPPSSA

Best Arabidopsis Sequence Match ( AT1G68960.1 )
(BLAST)

001: MSQLLCRISK LSTSRNRILC FRRSEFSTVT AEATTPYLLL GSDLVGKSPC DGKVVNFNLY DPRKQEQVKI ENKILSKEVY ESHKLGSSRG WLALLNKKDS
101: TVRLTNILNP SKKIISLPSL TRDKYESHVN VSVSSSNEED CVVAVKFYGS RVSLCRPGDS EWTRIDVPCP SFHSSTVIYS ERDRRFYLNN CNPDYTGPTD
201: FTPKSGLHTP VSGYKRFLFS NFLEEMPELE NERRLSRFRI QQQLVESASG QSFIVAWFVE SLTDKGEVAT WGDTRYNNNK DLCKKTHKIM VIRQDEEQGI
301: GPYTDDIGDL CIFLGENESF CLSAKDFPGL NPNSVYFAGH GSGYGIWDLA SCTIRYLSDS TPPPGRMFWL PPTISQ

Arabidopsis Description

Uncharacterized protein T6L1.14 [Source:UniProtKB/TrEMBL;Acc:Q9CAA6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.