Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000406.1-P | Field mustard | cytosol | 96.69 | 96.69 |
| CDX95668 | Canola | mitochondrion | 82.6 | 78.27 |
| AT4G16090.1 | Thale cress | mitochondrion | 45.58 | 61.57 |
| CDX86571 | Canola | cytosol | 11.6 | 48.84 |
| AT2G45930.1 | Thale cress | mitochondrion | 31.22 | 47.28 |
| CDX83388 | Canola | plastid | 46.41 | 43.86 |
| CDY10120 | Canola | mitochondrion | 40.88 | 43.79 |
| CDX95667 | Canola | mitochondrion, plastid | 45.3 | 43.04 |
| CDY47275 | Canola | cytosol | 42.54 | 40.1 |
| CDY65427 | Canola | cytosol | 21.27 | 39.9 |
| CDX90231 | Canola | mitochondrion | 39.23 | 38.8 |
| CDY50787 | Canola | cytosol | 34.53 | 38.58 |
| CDY51469 | Canola | mitochondrion | 38.95 | 38.52 |
| CDY57749 | Canola | mitochondrion | 37.29 | 38.35 |
| CDY57750 | Canola | plastid | 39.5 | 38.34 |
| CDY47276 | Canola | mitochondrion | 38.95 | 38.32 |
| CDY10119 | Canola | mitochondrion | 38.95 | 38.32 |
| CDY15545 | Canola | mitochondrion | 34.81 | 37.84 |
| CDX86573 | Canola | mitochondrion | 37.29 | 37.19 |
| CDX99886 | Canola | cytosol | 22.1 | 36.7 |
| CDX90173 | Canola | mitochondrion | 37.57 | 36.56 |
| CDY43323 | Canola | mitochondrion | 37.29 | 36.29 |
| CDX98187 | Canola | mitochondrion | 35.91 | 35.62 |
| CDX99797 | Canola | plastid | 36.19 | 35.03 |
| CDX99796 | Canola | mitochondrion | 37.57 | 34.26 |
| CDX99887 | Canola | extracellular, plasma membrane | 33.43 | 34.08 |
| CDY59993 | Canola | cytosol, plastid | 25.41 | 33.7 |
| CDY23447 | Canola | mitochondrion | 17.96 | 33.16 |
| CDY27327 | Canola | cytosol | 16.02 | 32.95 |
| CDY51468 | Canola | mitochondrion | 32.6 | 32.78 |
| CDX90232 | Canola | mitochondrion | 31.77 | 32.3 |
| CDY65207 | Canola | mitochondrion | 28.45 | 31.99 |
| CDX95813 | Canola | mitochondrion | 27.62 | 31.75 |
| CDX94769 | Canola | cytosol | 32.6 | 31.64 |
| CDX86572 | Canola | mitochondrion | 15.19 | 31.07 |
| CDY02744 | Canola | mitochondrion | 19.89 | 30.9 |
| CDY15546 | Canola | plastid | 32.04 | 29.67 |
| CDY48999 | Canola | cytosol | 31.22 | 29.12 |
| CDY53420 | Canola | cytosol | 26.52 | 28.57 |
| CDX95970 | Canola | mitochondrion | 28.18 | 27.57 |
| CDY33565 | Canola | plastid | 28.73 | 27.37 |
| CDY28820 | Canola | cytosol | 27.9 | 27.08 |
| CDX92018 | Canola | mitochondrion | 28.73 | 26.6 |
| CDY71779 | Canola | mitochondrion | 25.41 | 26.14 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.35 | 25.92 |
| CDX92019 | Canola | mitochondrion | 28.45 | 25.81 |
| CDY03244 | Canola | cytosol | 17.68 | 25.1 |
| CDY35144 | Canola | mitochondrion | 19.34 | 22.15 |
| CDY41583 | Canola | mitochondrion | 14.09 | 22.08 |
| CDY10122 | Canola | mitochondrion | 40.06 | 20.0 |
Protein Annotations
| EnsemblPlants:CDX83387 | EnsemblPlantsGene:GSBRNA2T00138953001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDX83387 | ProteinID:CDX83387.1 | SEG:seg | UniParc:UPI0004EE9FE7 | MapMan:35.2 | : |
Description
BnaA03g21190D
Coordinates
chrLK031832:+:1294646..1295734
Molecular Weight (calculated)
41192.7 Da
IEP (calculated)
7.077
GRAVY (calculated)
-0.457
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSSSSSTTT TNPYLMYGTT IYGNPEEDLH VRSDIHYFDP VKENEVIVRD KTLPMEFRKE CVLGGMSHGW VVFKARSDDK KDKVLYISDY YTPCGSKSNP
101: KTIPLHPMGQ QPGRPAQYLN ITNVAMTCSP DQSNDFAVAV NCLGPVINFF RPGGKHKYSG SVHFTTPLQH FNQSKVMYSK RDEKFYTTSV DGQFLVYYDA
201: FFEEDMTGSE VHELRFINHP ELAQSEWEIL DSCSKTVHLV ESPSGQRFLI KWYAQNHQPG KKITFLCRGT KRFMVFREEE ETRVMSYTED IGDLCIFLGN
301: SEPFCVNASS FPGLNPNSIY FAGDGFGVYD IATRKPRSFR PKSPAAFSRA SPAFQWIPPM SL
101: KTIPLHPMGQ QPGRPAQYLN ITNVAMTCSP DQSNDFAVAV NCLGPVINFF RPGGKHKYSG SVHFTTPLQH FNQSKVMYSK RDEKFYTTSV DGQFLVYYDA
201: FFEEDMTGSE VHELRFINHP ELAQSEWEIL DSCSKTVHLV ESPSGQRFLI KWYAQNHQPG KKITFLCRGT KRFMVFREEE ETRVMSYTED IGDLCIFLGN
301: SEPFCVNASS FPGLNPNSIY FAGDGFGVYD IATRKPRSFR PKSPAAFSRA SPAFQWIPPM SL
001: MSSLLLSLSS KASLRKLPLR CHTLRMFSSS TTNPYLLYRV INYGSSMDDI HVTSNIHYFD PVKEDEVIVR DKVLPMELRK GCLVGMSHGW GVFKAVCDYN
101: EYKAIYVTDY YNPCGSKSVK SIPLHPLGKP IAIQQQAITN AAMTCSPDQS KDFAVAVKCL GPMINFNRPG GTHKDSGSVI FKTPFQYFDQ SKVMYSKRDE
201: KFYTPSFGGH FLVFWDSFFG EDMTGSELVE LRFCNVPKLT QSEWELLDSC SKTVYLVESP SGQRFLIK
101: EYKAIYVTDY YNPCGSKSVK SIPLHPLGKP IAIQQQAITN AAMTCSPDQS KDFAVAVKCL GPMINFNRPG GTHKDSGSVI FKTPFQYFDQ SKVMYSKRDE
201: KFYTPSFGGH FLVFWDSFFG EDMTGSELVE LRFCNVPKLT QSEWELLDSC SKTVYLVESP SGQRFLIK
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45930.1); Has 76 Blast hits to 76 proteins in 2 spec /.../rchae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT4G16090]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.