CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47275	Canola	cytosol	92.01	80.99
CDX86571	Canola	cytosol	18.93	74.42
CDX86573	Canola	mitochondrion	67.16	62.53
CDX86572	Canola	mitochondrion	32.54	62.15
CDY15545	Canola	mitochondrion	57.1	57.96
CDY10119	Canola	mitochondrion	57.4	52.72
CDY47276	Canola	mitochondrion	56.21	51.63
CDY57750	Canola	plastid	53.85	48.79
CDY43323	Canola	mitochondrion	52.96	48.12
CDX90173	Canola	mitochondrion	52.96	48.12
CDY57749	Canola	mitochondrion	49.7	47.73
CDY50787	Canola	cytosol	45.56	47.53
CDX99797	Canola	plastid	51.48	46.52
CDX90231	Canola	mitochondrion	50.0	46.17
CDY51469	Canola	mitochondrion	50.0	46.17
CDX99796	Canola	mitochondrion	52.66	44.84
CDX98187	Canola	mitochondrion	48.22	44.66
CDX99886	Canola	cytosol	28.4	44.04
CDX99887	Canola	extracellular, plasma membrane	45.27	43.1
CDX90232	Canola	mitochondrion	43.79	41.57
CDX83387	Canola	cytosol	43.79	40.88
CDY51468	Canola	mitochondrion	43.49	40.83
CDY15546	Canola	plastid	47.04	40.66
CDX95668	Canola	mitochondrion	44.38	39.27
CDX95667	Canola	mitochondrion, plastid	43.79	38.85
CDX83388	Canola	plastid	42.9	37.86
CDY59993	Canola	cytosol, plastid	29.88	37.0
CDY65427	Canola	cytosol	20.41	35.75
CDY02744	Canola	mitochondrion	23.67	34.33
CDX95813	Canola	mitochondrion	31.07	33.33
CDY65207	Canola	mitochondrion	30.77	32.3
CDY23447	Canola	mitochondrion	18.64	32.14
CDY10122	Canola	mitochondrion	68.64	32.0
CDY41583	Canola	mitochondrion	20.71	30.3
CDY71779	Canola	mitochondrion	31.07	29.83
CDY27327	Canola	cytosol	15.38	29.55
CDX94769	Canola	cytosol	32.54	29.49
CDY33565	Canola	plastid	32.84	29.21
CDX95970	Canola	mitochondrion	31.95	29.19
CDY48999	Canola	cytosol	33.43	29.12
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.84	29.06
CDY03244	Canola	cytosol	21.6	28.63
CDY28820	Canola	cytosol	31.36	28.42
CDY53420	Canola	cytosol	28.11	28.27
CDX92018	Canola	mitochondrion	29.59	25.58
CDY35144	Canola	mitochondrion	23.67	25.32
CDX92019	Canola	mitochondrion	27.51	23.31

Protein Annotations

EnsemblPlants:CDY10120	EnsemblPlantsGene:GSBRNA2T00031925001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDY10120	ProteinID:CDY10120.1	UniParc:UPI0004EABCA2	UniProt:A0A078F6M7	MapMan:35.2	:

Description

BnaC05g03630DBnaC05g03630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6M7]

Coordinates

chrLK032001:+:117524..118885

Molecular Weight (calculated)

38245.8 Da

IEP (calculated)

5.400

GRAVY (calculated)

-0.240

Length

338 amino acids

Sequence
(BLAST)

001: MSQFLFRLSK LSSRNNNVLM IHERARLFST RPYLTLGTRV KEVLPGGYKI ADILLFDPAE EELVTVPDKT IPKELMDEEM VGASHGWGVF CARHDRSVRI
101: SDLYNPLASK SNPTMITLPR LTALSSNYCN VAMTSSPHLE DCVVAIKFVG DHLSLCRPGR DLEWTNILTP PSCLENSNLM YSKRDKKFYL PAPGGKYLFS
201: YNLHFKEEDI PEVQEVVYRG HPELDQSEWE LLSSCTRTEH LVESPFLRFM VFREEETTEG SIMCYTEDIG DMCIFLANSE AFCVPASSCT GLKPNSIYHM
301: GRGLGFYDLT TGNPHQYLAP DGAPSVLTQP YWLPPFST

Best Arabidopsis Sequence Match ( AT1G05550.3 )
(BLAST)

001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI

Arabidopsis Description

Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.