CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41583	Canola	mitochondrion	57.95	88.31
CDX95970	Canola	mitochondrion	58.24	55.41
CDY33565	Canola	plastid	57.67	53.42
CDY23447	Canola	mitochondrion	24.43	43.88
CDY27327	Canola	cytosol	20.74	41.48
CDX95813	Canola	mitochondrion	36.65	40.95
CDY65207	Canola	mitochondrion	35.8	39.13
CDX86571	Canola	cytosol	8.81	36.05
CDX86572	Canola	mitochondrion	17.33	34.46
CDY59993	Canola	cytosol, plastid	25.28	32.6
CDY10120	Canola	mitochondrion	29.83	31.07
CDY02744	Canola	mitochondrion	20.45	30.9
CDY15545	Canola	mitochondrion	28.98	30.63
CDY10119	Canola	mitochondrion	31.82	30.43
CDY47276	Canola	mitochondrion	31.53	30.16
CDX86573	Canola	mitochondrion	30.97	30.03
CDY57749	Canola	mitochondrion	29.83	29.83
CDX92019	Canola	mitochondrion	33.52	29.57
CDX92018	Canola	mitochondrion	32.1	28.9
CDY51469	Canola	mitochondrion	29.83	28.69
CDX90231	Canola	mitochondrion	29.83	28.69
CDX90173	Canola	mitochondrion	29.83	28.23
CDY57750	Canola	plastid	29.83	28.15
CDY28820	Canola	cytosol	29.83	28.15
CDY65427	Canola	cytosol	15.34	27.98
CDY43323	Canola	mitochondrion	29.55	27.96
CDX98187	Canola	mitochondrion	28.98	27.95
CDY47275	Canola	cytosol	30.4	27.86
CDX99797	Canola	plastid	28.98	27.27
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.55	27.23
CDX99886	Canola	cytosol	16.76	27.06
CDX83388	Canola	plastid	29.26	26.89
CDY50787	Canola	cytosol	24.72	26.85
CDX90232	Canola	mitochondrion	26.7	26.4
CDY51468	Canola	mitochondrion	26.42	25.83
CDY15546	Canola	plastid	28.41	25.58
CDX95667	Canola	mitochondrion, plastid	27.56	25.46
CDX83387	Canola	cytosol	26.14	25.41
CDX99887	Canola	extracellular, plasma membrane	25.57	25.35
CDX95668	Canola	mitochondrion	26.7	24.61
CDX99796	Canola	mitochondrion	26.7	23.68
CDX94769	Canola	cytosol	24.15	22.79
CDY53420	Canola	cytosol	21.59	22.62
CDY48999	Canola	cytosol	24.43	22.16
CDY03244	Canola	cytosol	15.62	21.57
CDY35144	Canola	mitochondrion	17.61	19.62
CDY10122	Canola	mitochondrion	34.09	16.55

Protein Annotations

EnsemblPlants:CDY71779	EnsemblPlantsGene:GSBRNA2T00020191001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDY71779	ProteinID:CDY71779.1	SUPFAM:SSF82171	UniParc:UPI0004EDAED9	UniProt:A0A078JYP2	MapMan:35.2

Description

BnaCnng74420DBnaCnng74420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYP2]

Coordinates

chrLK047463:+:443..1905

Molecular Weight (calculated)

39647.2 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.458

Length

352 amino acids

Sequence
(BLAST)

001: MSQLIGRISK LSSPLNRRRF STTPYLYLGR EVVGESPCGG NVVNFNLYDP RKEERAVIEN QTLSKHLRES SRIGSSRGWL AMMNKRDSTV RLTNILNNNP
101: SKKTISLPPL IKDETERLIN VSVSSNDGDC VAVASARSDG SRLSMCRVGD SEWTRVDLPC PSFRLSPVMY SDRDRKFYVN SCSSDYTGPT DFTSKYGPVN
201: AYVRFPLSNS PKLDLRRLNI HQLFVQSPSG ESFIVMWCLD CMTDKGEAVE WKDKMSNQRD LLIKTRNIMV YRQDTEKGTG PYTKDIGDLC IFVGENEPFC
301: LSASDYPGLK PNSVYFAGRC SGYGICDLAS STISYLSDSP IRHPLFWIPP QK

Best Arabidopsis Sequence Match ( AT1G68960.1 )
(BLAST)

001: MSQLLCRISK LSTSRNRILC FRRSEFSTVT AEATTPYLLL GSDLVGKSPC DGKVVNFNLY DPRKQEQVKI ENKILSKEVY ESHKLGSSRG WLALLNKKDS
101: TVRLTNILNP SKKIISLPSL TRDKYESHVN VSVSSSNEED CVVAVKFYGS RVSLCRPGDS EWTRIDVPCP SFHSSTVIYS ERDRRFYLNN CNPDYTGPTD
201: FTPKSGLHTP VSGYKRFLFS NFLEEMPELE NERRLSRFRI QQQLVESASG QSFIVAWFVE SLTDKGEVAT WGDTRYNNNK DLCKKTHKIM VIRQDEEQGI
301: GPYTDDIGDL CIFLGENESF CLSAKDFPGL NPNSVYFAGH GSGYGIWDLA SCTIRYLSDS TPPPGRMFWL PPTISQ

Arabidopsis Description

Uncharacterized protein T6L1.14 [Source:UniProtKB/TrEMBL;Acc:Q9CAA6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.