Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15545 | Canola | mitochondrion | 84.88 | 21.92 |
| CDX86573 | Canola | mitochondrion | 87.21 | 20.66 |
| CDY65427 | Canola | cytosol | 45.35 | 20.21 |
| CDY10120 | Canola | mitochondrion | 74.42 | 18.93 |
| AT1G05550.3 | Thale cress | cytosol | 79.07 | 17.66 |
| CDX99886 | Canola | cytosol | 44.19 | 17.43 |
| CDY47275 | Canola | cytosol | 74.42 | 16.67 |
| CDY27327 | Canola | cytosol | 33.72 | 16.48 |
| CDY50787 | Canola | cytosol | 56.98 | 15.12 |
| CDY23447 | Canola | mitochondrion | 33.72 | 14.8 |
| CDX90231 | Canola | mitochondrion | 62.79 | 14.75 |
| CDY51469 | Canola | mitochondrion | 61.63 | 14.48 |
| CDY59993 | Canola | cytosol, plastid | 45.35 | 14.29 |
| CDX90173 | Canola | mitochondrion | 59.3 | 13.71 |
| CDX99797 | Canola | plastid | 59.3 | 13.64 |
| CDY43323 | Canola | mitochondrion | 58.14 | 13.44 |
| CDY57750 | Canola | plastid | 55.81 | 12.87 |
| CDY47276 | Canola | mitochondrion | 54.65 | 12.77 |
| CDY10119 | Canola | mitochondrion | 54.65 | 12.77 |
| CDX90232 | Canola | mitochondrion | 51.16 | 12.36 |
| CDX99887 | Canola | extracellular, plasma membrane | 50.0 | 12.11 |
| CDY57749 | Canola | mitochondrion | 48.84 | 11.93 |
| CDY51468 | Canola | mitochondrion | 48.84 | 11.67 |
| CDX83387 | Canola | cytosol | 48.84 | 11.6 |
| CDX95667 | Canola | mitochondrion, plastid | 50.0 | 11.29 |
| CDX83388 | Canola | plastid | 50.0 | 11.23 |
| CDY02744 | Canola | mitochondrion | 30.23 | 11.16 |
| CDX99796 | Canola | mitochondrion | 51.16 | 11.08 |
| CDY48999 | Canola | cytosol | 50.0 | 11.08 |
| CDX95668 | Canola | mitochondrion | 48.84 | 10.99 |
| CDX94769 | Canola | cytosol | 47.67 | 10.99 |
| CDX98187 | Canola | mitochondrion | 46.51 | 10.96 |
| CDY53420 | Canola | cytosol | 38.37 | 9.82 |
| CDY15546 | Canola | plastid | 44.19 | 9.72 |
| CDY65207 | Canola | mitochondrion | 34.88 | 9.32 |
| CDX95813 | Canola | mitochondrion | 33.72 | 9.21 |
| CDY35144 | Canola | mitochondrion | 33.72 | 9.18 |
| CDY28820 | Canola | cytosol | 38.37 | 8.85 |
| CDY10122 | Canola | mitochondrion | 74.42 | 8.83 |
| CDY71779 | Canola | mitochondrion | 36.05 | 8.81 |
| CDX92018 | Canola | mitochondrion | 38.37 | 8.44 |
| CDY33565 | Canola | plastid | 37.21 | 8.42 |
| CDX95970 | Canola | mitochondrion | 36.05 | 8.38 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 36.05 | 8.12 |
| CDX92019 | Canola | mitochondrion | 37.21 | 8.02 |
| CDY03244 | Canola | cytosol | 12.79 | 4.31 |
| CDY41583 | Canola | mitochondrion | 2.33 | 0.87 |
| CDX86572 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86571 | EnsemblPlantsGene:GSBRNA2T00145198001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDX86571 | ProteinID:CDX86571.1 | UniParc:UPI0004EEF14A | MapMan:35.2 | : | : |
Description
BnaC08g01320D
Coordinates
chrLK031846:-:732759..733019
Molecular Weight (calculated)
9459.3 Da
IEP (calculated)
4.231
GRAVY (calculated)
0.021
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MLFSEEETTE GKIMCYTEDI GDMCIFIASN EAFCIPASSC PGLKPSTIYF MGRGFGSYDL TTGDTHHYKA PGGVITIPYW LPPFST
001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI
Arabidopsis Description
Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.