Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86571 | Canola | cytosol | 17.66 | 79.07 |
| CDY15545 | Canola | mitochondrion | 57.14 | 66.07 |
| CDX86573 | Canola | mitochondrion | 59.74 | 63.36 |
| CDX86572 | Canola | mitochondrion | 28.57 | 62.15 |
| Bra030614.1-P | Field mustard | mitochondrion | 56.62 | 61.76 |
| AT1G05540.1 | Thale cress | mitochondrion | 49.61 | 52.04 |
| AT1G30170.1 | Thale cress | mitochondrion | 41.56 | 43.72 |
| AT1G30160.2 | Thale cress | mitochondrion | 39.74 | 41.8 |
| AT5G67040.1 | Thale cress | mitochondrion | 17.66 | 41.21 |
| AT2G45940.2 | Thale cress | cytosol | 35.06 | 36.99 |
| AT4G16080.1 | Thale cress | mitochondrion | 33.25 | 36.16 |
| AT5G55440.1 | Thale cress | mitochondrion | 29.61 | 31.23 |
| AT4G16090.1 | Thale cress | mitochondrion | 21.56 | 30.97 |
| AT5G46140.1 | Thale cress | cytosol | 22.86 | 30.45 |
| AT5G46130.1 | Thale cress | mitochondrion | 28.83 | 29.52 |
| AT5G53780.1 | Thale cress | cytosol | 28.83 | 29.52 |
| AT4G14260.1 | Thale cress | nucleus | 28.83 | 29.29 |
| AT4G25920.1 | Thale cress | mitochondrion, plastid | 29.61 | 29.23 |
| AT5G03390.1 | Thale cress | mitochondrion | 28.31 | 29.22 |
| AT1G68960.1 | Thale cress | mitochondrion | 28.05 | 28.72 |
| AT4G25930.1 | Thale cress | mitochondrion | 27.01 | 28.34 |
| AT5G53790.1 | Thale cress | cytosol | 27.27 | 27.63 |
| AT2G45930.1 | Thale cress | mitochondrion | 15.58 | 25.1 |
Protein Annotations
| MapMan:35.2 | EntrezGene:837057 | ProteinID:AEE27853.1 | ArrayExpress:AT1G05550 | EnsemblPlantsGene:AT1G05550 | RefSeq:AT1G05550 |
| TAIR:AT1G05550 | RefSeq:AT1G05550-TAIR-G | EnsemblPlants:AT1G05550.3 | TAIR:AT1G05550.3 | Unigene:At.25079 | InterPro:DUF295 |
| UniProt:F4I8S9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001184912.1 | PFAM:PF03478 |
| PO:PO:0000084 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 |
| UniParc:UPI0001E92BB6 | : | : | : | : | : |
Description
Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
Coordinates
chr1:-:1640959..1643917
Molecular Weight (calculated)
43011.2 Da
IEP (calculated)
6.997
GRAVY (calculated)
-0.055
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.