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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • endoplasmic reticulum 1
  • golgi 1
  • extracellular 1
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:endoplasmic reticulum, extracellular, golgi, mitochondrion, plastid
BaCelLo:endoplasmic reticulum, extracellular, golgi
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G45930.1 Thale cress mitochondrion 52.99 59.41
CDX95668 Canola mitochondrion 66.42 46.6
Bra000406.1-P Field mustard cytosol 62.69 46.41
CDX83387 Canola cytosol 61.57 45.58
AT2G45940.2 Thale cress cytosol 39.18 28.77
AT4G16080.1 Thale cress mitochondrion 37.31 28.25
AT1G05540.1 Thale cress mitochondrion 38.43 28.07
AT1G30170.1 Thale cress mitochondrion 35.45 25.96
AT1G30160.2 Thale cress mitochondrion 32.09 23.5
AT1G05550.3 Thale cress cytosol 30.97 21.56
AT5G55440.1 Thale cress mitochondrion 28.73 21.1
AT5G03390.1 Thale cress mitochondrion 28.73 20.64
AT4G25920.1 Thale cress mitochondrion, plastid 28.36 19.49
AT4G25930.1 Thale cress mitochondrion 26.49 19.35
AT4G14260.1 Thale cress nucleus 27.24 19.26
AT5G53780.1 Thale cress cytosol 26.87 19.15
AT1G68960.1 Thale cress mitochondrion 26.49 18.88
AT5G46130.1 Thale cress mitochondrion 24.25 17.29
AT5G46140.1 Thale cress cytosol 17.91 16.61
AT5G53790.1 Thale cress cytosol 23.51 16.58
AT5G67040.1 Thale cress mitochondrion 7.09 11.52
Protein Annotations
ArrayExpress:AT4G16090EnsemblPlants:AT4G16090.1EnsemblPlantsGene:AT4G16090EntrezGene:827294PANTHER:PTHR31681PANTHER:PTHR31681:SF3
ProteinID:AEE83691.1RefSeq:AT4G16090RefSeq:AT4G16090-TAIR-GRefSeq:NP_193344.5SEG:segTAIR:AT4G16090
TAIR:AT4G16090.1UniParc:UPI0001A7B0D7UniProt:F4JL03MapMan:35.2::
Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45930.1); Has 76 Blast hits to 76 proteins in 2 spec /.../rchae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT4G16090]
Coordinates
chr4:+:9103040..9103965
Molecular Weight (calculated)
30336.5 Da
IEP (calculated)
8.371
GRAVY (calculated)
-0.193
Length
268 amino acids
Sequence
(BLAST)
001: MSSLLLSLSS KASLRKLPLR CHTLRMFSSS TTNPYLLYRV INYGSSMDDI HVTSNIHYFD PVKEDEVIVR DKVLPMELRK GCLVGMSHGW GVFKAVCDYN
101: EYKAIYVTDY YNPCGSKSVK SIPLHPLGKP IAIQQQAITN AAMTCSPDQS KDFAVAVKCL GPMINFNRPG GTHKDSGSVI FKTPFQYFDQ SKVMYSKRDE
201: KFYTPSFGGH FLVFWDSFFG EDMTGSELVE LRFCNVPKLT QSEWELLDSC SKTVYLVESP SGQRFLIK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.