Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G67040.1 | Thale cress | mitochondrion | 29.86 | 66.06 |
| CDY59993 | Canola | cytosol, plastid | 43.56 | 58.24 |
| Bra020431.1-P | Field mustard | mitochondrion | 55.89 | 56.51 |
| AT1G05540.1 | Thale cress | mitochondrion | 37.26 | 37.06 |
| AT1G30170.1 | Thale cress | mitochondrion | 35.62 | 35.52 |
| AT1G30160.2 | Thale cress | mitochondrion | 34.25 | 34.15 |
| AT5G53780.1 | Thale cress | cytosol | 34.79 | 33.78 |
| AT4G16080.1 | Thale cress | mitochondrion | 31.51 | 32.49 |
| AT5G46140.1 | Thale cress | cytosol | 25.48 | 32.18 |
| AT2G45940.2 | Thale cress | cytosol | 30.96 | 30.96 |
| AT1G68960.1 | Thale cress | mitochondrion | 31.78 | 30.85 |
| AT5G53790.1 | Thale cress | cytosol | 32.05 | 30.79 |
| AT5G46130.1 | Thale cress | mitochondrion | 31.23 | 30.32 |
| AT1G05550.3 | Thale cress | cytosol | 31.23 | 29.61 |
| AT4G14260.1 | Thale cress | nucleus | 30.68 | 29.55 |
| AT4G25920.1 | Thale cress | mitochondrion, plastid | 31.23 | 29.23 |
| AT4G25930.1 | Thale cress | mitochondrion | 29.32 | 29.16 |
| AT4G16090.1 | Thale cress | mitochondrion | 21.1 | 28.73 |
| AT5G03390.1 | Thale cress | mitochondrion | 29.32 | 28.69 |
| AT2G45930.1 | Thale cress | mitochondrion | 15.89 | 24.27 |
Protein Annotations
| ArrayExpress:AT5G55440 | EMBL:DQ447078 | EnsemblPlants:AT5G55440.1 | EnsemblPlantsGene:AT5G55440 | EntrezGene:835637 | InterPro:DUF295 |
| PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 | ProteinID:AED96629.1 | ProteinID:BAB08561.1 | RefSeq:AT5G55440 |
| RefSeq:AT5G55440-TAIR-G | RefSeq:NP_200355.1 | TAIR:AT5G55440 | TAIR:AT5G55440.1 | Unigene:At.55564 | UniParc:UPI00000A383D |
| UniProt:Q9FJ66 | MapMan:35.2 | : | : | : | : |
Description
F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FJ66]
Coordinates
chr5:+:22465693..22467209
Molecular Weight (calculated)
41514.5 Da
IEP (calculated)
8.572
GRAVY (calculated)
-0.393
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MALFFSRISK LSGRRNNARF FSSLPPSPCL VLTTKKLRGS PEEGLIVHHK LFEPATEKKV YGNEKKYPKE LHGAPLLGAS KGWVAFFKEK DISVHLTDLY
101: KPCVSSPRVI SLPSLKLDYK PATHATEVCL SSSDPVQDDY YVAAKFNDYH VSVCRPRWDS DWTHNETGYS LLPASELMYS KRDKAFHFTS FKGLYMGSLY
201: LSKKDEIKYK EIRLRNLPKI PEAGWEMLDK CSMTNHLVDS PSGELFFIKW YTQCIHKEDE DGDLECLHSK TKRFMVFRQD GMSKDFGYTE DIGDLCIFLG
301: KSEAFCVTAS LYPGLKPNSI YYLGPRFGSY DLASGTNSSF TFDRFGKPSL VVPYWIHSTS SLSSS
101: KPCVSSPRVI SLPSLKLDYK PATHATEVCL SSSDPVQDDY YVAAKFNDYH VSVCRPRWDS DWTHNETGYS LLPASELMYS KRDKAFHFTS FKGLYMGSLY
201: LSKKDEIKYK EIRLRNLPKI PEAGWEMLDK CSMTNHLVDS PSGELFFIKW YTQCIHKEDE DGDLECLHSK TKRFMVFRQD GMSKDFGYTE DIGDLCIFLG
301: KSEAFCVTAS LYPGLKPNSI YYLGPRFGSY DLASGTNSSF TFDRFGKPSL VVPYWIHSTS SLSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.