Factsheet for AT1G30160.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010792.1-P	Field mustard	cytosol	36.34	75.14
CDX99886	Canola	cytosol	41.53	69.72
CDX90232	Canola	mitochondrion	67.76	69.66
Bra010791.1-P	Field mustard	mitochondrion	67.76	69.66
CDY51468	Canola	mitochondrion	68.03	69.17
AT1G05540.1	Thale cress	mitochondrion	53.83	53.68
AT1G30170.1	Thale cress	mitochondrion	49.45	49.45
AT1G05550.3	Thale cress	cytosol	41.8	39.74
AT4G16080.1	Thale cress	mitochondrion	38.25	39.55
AT2G45940.2	Thale cress	cytosol	39.07	39.18
AT5G67040.1	Thale cress	mitochondrion	17.21	38.18
AT5G46140.1	Thale cress	cytosol	27.6	34.95
AT5G55440.1	Thale cress	mitochondrion	34.15	34.25
AT5G46130.1	Thale cress	mitochondrion	33.61	32.71
AT4G14260.1	Thale cress	nucleus	33.33	32.19
AT4G16090.1	Thale cress	mitochondrion	23.5	32.09
AT4G25920.1	Thale cress	mitochondrion, plastid	33.88	31.79
AT4G25930.1	Thale cress	mitochondrion	30.33	30.25
AT2G45930.1	Thale cress	mitochondrion	19.13	29.29
AT5G53790.1	Thale cress	cytosol	30.33	29.21
AT1G68960.1	Thale cress	mitochondrion	29.51	28.72
AT5G53780.1	Thale cress	cytosol	28.69	27.93
AT5G03390.1	Thale cress	mitochondrion	27.32	26.81

Protein Annotations

MapMan:35.2	EntrezGene:839896	ProteinID:AAG50858.1	ProteinID:AEE31186.1	ProteinID:AEE31187.1	ArrayExpress:AT1G30160
EnsemblPlantsGene:AT1G30160	RefSeq:AT1G30160	TAIR:AT1G30160	RefSeq:AT1G30160-TAIR-G	EnsemblPlants:AT1G30160.2	TAIR:AT1G30160.2
EMBL:BT014976	EMBL:BT015716	RefSeq:NP_001031113.1	RefSeq:NP_174308.1	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
UniProt:Q6DBP6	UniParc:UPI00003BF6F9	SEG:seg	:	:	:

Description

At1g30160 [Source:UniProtKB/TrEMBL;Acc:Q6DBP6]

Coordinates

chr1:+:10606159..10607944

Molecular Weight (calculated)

41962.1 Da

IEP (calculated)

7.185

GRAVY (calculated)

-0.422

Length

366 amino acids

Sequence
(BLAST)

001: MSRLLSKLSP LIHKSSRNIR SFSSSTTGPC VSICTVVEPS PDGNLGQVLL FNIPDMKLVT ADKIYPDELY DAQLVGASHG WGLFSDRTNR SALISDYLNP
101: YASKSKPKMI HLPFFTPMYS GQTEVVCNVA MSSPPPDQDD DHEDWVVGIK FLGRQLSLCR PRHDLRWTNI LTPFESWEVS ELMYSKKDQR FYLLAPGGNY
201: LCSWDLNFKE DKKPKFHELV LHNLPNMPRS LWKQLDSYGR EDHWVESPSG ESFLVKWFCE YSPENTSNWC KSPIVMVFRE EETKDGRKNM RYTDDIGDLC
301: IFISKGEDFC VKASSCPGLQ PNSISLHGRL FAILNLTKRT MGCYEYPQGI PKRIPYLPYW LPPFSP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.