Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- plastid 2
- mitochondrion 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010791.1-P | Field mustard | mitochondrion | 100.0 | 100.0 |
| CDY51468 | Canola | mitochondrion | 97.19 | 96.11 |
| AT1G30160.2 | Thale cress | mitochondrion | 69.66 | 67.76 |
| CDX99886 | Canola | cytosol | 40.17 | 65.6 |
| CDY50787 | Canola | cytosol | 46.63 | 51.23 |
| CDX86571 | Canola | cytosol | 12.36 | 51.16 |
| CDX99797 | Canola | plastid | 51.69 | 49.2 |
| CDY57749 | Canola | mitochondrion | 47.47 | 48.01 |
| CDY10119 | Canola | mitochondrion | 48.88 | 47.28 |
| CDY47276 | Canola | mitochondrion | 48.6 | 47.01 |
| CDX90231 | Canola | mitochondrion | 47.19 | 45.9 |
| CDY51469 | Canola | mitochondrion | 46.63 | 45.36 |
| CDX98187 | Canola | mitochondrion | 46.35 | 45.21 |
| CDX86572 | Canola | mitochondrion | 22.19 | 44.63 |
| CDY10120 | Canola | mitochondrion | 41.57 | 43.79 |
| CDX99887 | Canola | extracellular, plasma membrane | 42.13 | 42.25 |
| CDY43323 | Canola | mitochondrion | 43.82 | 41.94 |
| CDX90173 | Canola | mitochondrion | 43.26 | 41.4 |
| CDY57750 | Canola | plastid | 43.26 | 41.29 |
| CDY15546 | Canola | plastid | 45.22 | 41.18 |
| CDY47275 | Canola | cytosol | 43.54 | 40.36 |
| CDX86573 | Canola | mitochondrion | 40.73 | 39.94 |
| CDY15545 | Canola | mitochondrion | 37.36 | 39.94 |
| CDX99796 | Canola | mitochondrion | 42.98 | 38.54 |
| CDX83388 | Canola | plastid | 40.45 | 37.6 |
| CDX95667 | Canola | mitochondrion, plastid | 39.89 | 37.27 |
| CDY59993 | Canola | cytosol, plastid | 27.53 | 35.9 |
| CDY65427 | Canola | cytosol | 18.82 | 34.72 |
| CDX95668 | Canola | mitochondrion | 36.24 | 33.77 |
| CDX83387 | Canola | cytosol | 32.3 | 31.77 |
| CDY27327 | Canola | cytosol | 15.17 | 30.68 |
| CDY02744 | Canola | mitochondrion | 19.94 | 30.47 |
| CDX95813 | Canola | mitochondrion | 26.69 | 30.16 |
| CDX94769 | Canola | cytosol | 31.18 | 29.76 |
| CDY48999 | Canola | cytosol | 32.3 | 29.64 |
| CDY28820 | Canola | cytosol | 30.34 | 28.95 |
| CDY65207 | Canola | mitochondrion | 25.84 | 28.57 |
| CDY23447 | Canola | mitochondrion | 15.73 | 28.57 |
| CDY53420 | Canola | cytosol | 26.97 | 28.57 |
| CDY03244 | Canola | cytosol | 19.94 | 27.84 |
| CDX95970 | Canola | mitochondrion | 28.09 | 27.03 |
| CDY71779 | Canola | mitochondrion | 26.4 | 26.7 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.81 | 25.92 |
| CDY33565 | Canola | plastid | 26.97 | 25.26 |
| CDY41583 | Canola | mitochondrion | 16.29 | 25.11 |
| CDX92018 | Canola | mitochondrion | 27.53 | 25.06 |
| CDY10122 | Canola | mitochondrion | 49.44 | 24.28 |
| CDX92019 | Canola | mitochondrion | 25.28 | 22.56 |
| CDY35144 | Canola | mitochondrion | 19.38 | 21.84 |
Protein Annotations
| EnsemblPlants:CDX90232 | EnsemblPlantsGene:GSBRNA2T00150795001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDX90232 | ProteinID:CDX90232.1 | SEG:seg | UniParc:UPI0002546F1F | MapMan:35.2 | : |
Description
BnaA08g17520D
Coordinates
chrLK031862:-:767893..769318
Molecular Weight (calculated)
40924.9 Da
IEP (calculated)
7.351
GRAVY (calculated)
-0.442
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRLLFKLSP LIYKSRSVRT FSSSTTGPCT PMCMIMSPSP NGNVGEALLF DVDSCELVRS PEKAFPKELY NATLVGTSRG WGMFSNRLDR SAVISDFLNP
101: YASKSEPKVV PLPPFTTMHT YQTEVVCNMA MSSSPEPYDK DWVVGIKFLG KQLSFCRPHL DLRWTNIPTP FESWDTSKLM YSKKDQRFNL LAPGGNYLCS
201: WDHDKKPKFH ELVLHNLPSM PREQQQRLDS NCREDHWVES PSGESFLVKW FSEYTPEGCK VPMVMVFREE DTKDGRKNMH YTDDIGDMCI FISKSEDFCV
301: KASSCRGLNP NSIFLNGRLF VSLNMSKFSC RLYEYPEDTP YTIPYSPYWL PPFSSY
101: YASKSEPKVV PLPPFTTMHT YQTEVVCNMA MSSSPEPYDK DWVVGIKFLG KQLSFCRPHL DLRWTNIPTP FESWDTSKLM YSKKDQRFNL LAPGGNYLCS
201: WDHDKKPKFH ELVLHNLPSM PREQQQRLDS NCREDHWVES PSGESFLVKW FSEYTPEGCK VPMVMVFREE DTKDGRKNMH YTDDIGDMCI FISKSEDFCV
301: KASSCRGLNP NSIFLNGRLF VSLNMSKFSC RLYEYPEDTP YTIPYSPYWL PPFSSY
001: MSRLLSKLSP LIHKSSRNIR SFSSSTTGPC VSICTVVEPS PDGNLGQVLL FNIPDMKLVT ADKIYPDELY DAQLVGASHG WGLFSDRTNR SALISDYLNP
101: YASKSKPKMI HLPFFTPMYS GQTEVVCNVA MSSPPPDQDD DHEDWVVGIK FLGRQLSLCR PRHDLRWTNI LTPFESWEVS ELMYSKKDQR FYLLAPGGNY
201: LCSWDLNFKE DKKPKFHELV LHNLPNMPRS LWKQLDSYGR EDHWVESPSG ESFLVKWFCE YSPENTSNWC KSPIVMVFRE EETKDGRKNM RYTDDIGDLC
301: IFISKGEDFC VKASSCPGLQ PNSISLHGRL FAILNLTKRT MGCYEYPQGI PKRIPYLPYW LPPFSP
101: YASKSKPKMI HLPFFTPMYS GQTEVVCNVA MSSPPPDQDD DHEDWVVGIK FLGRQLSLCR PRHDLRWTNI LTPFESWEVS ELMYSKKDQR FYLLAPGGNY
201: LCSWDLNFKE DKKPKFHELV LHNLPNMPRS LWKQLDSYGR EDHWVESPSG ESFLVKWFCE YSPENTSNWC KSPIVMVFRE EETKDGRKNM RYTDDIGDLC
301: IFISKGEDFC VKASSCPGLQ PNSISLHGRL FAILNLTKRT MGCYEYPQGI PKRIPYLPYW LPPFSP
Arabidopsis Description
At1g30160 [Source:UniProtKB/TrEMBL;Acc:Q6DBP6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.