CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017579.1-P	Field mustard	cytosol	79.43	87.76
CDY03244	Canola	cytosol	40.82	50.59
CDX86571	Canola	cytosol	9.18	33.72
CDY53420	Canola	cytosol	32.91	30.95
CDY65427	Canola	cytosol	18.04	29.53
AT5G46130.1	Thale cress	mitochondrion	33.23	27.93
AT5G46140.1	Thale cress	cytosol	24.68	26.99
CDX99886	Canola	cytosol	18.04	26.15
CDY27327	Canola	cytosol	14.24	25.57
CDX95667	Canola	mitochondrion, plastid	28.8	23.88
CDY10120	Canola	mitochondrion	25.32	23.67
CDY47275	Canola	cytosol	28.16	23.18
CDY59993	Canola	cytosol, plastid	19.94	23.08
CDX90231	Canola	mitochondrion	26.58	22.95
CDY51469	Canola	mitochondrion	26.58	22.95
CDY43323	Canola	mitochondrion	26.9	22.85
CDY57750	Canola	plastid	26.9	22.79
CDX94769	Canola	cytosol	26.58	22.52
CDX83388	Canola	plastid	27.22	22.45
CDY57749	Canola	mitochondrion	25.0	22.44
CDX90173	Canola	mitochondrion	25.95	22.04
CDY48999	Canola	cytosol	26.58	21.65
CDX95668	Canola	mitochondrion	25.63	21.2
CDY15545	Canola	mitochondrion	22.15	21.02
CDY10119	Canola	mitochondrion	24.37	20.92
CDY47276	Canola	mitochondrion	24.05	20.65
CDX99797	Canola	plastid	24.37	20.59
CDX99796	Canola	mitochondrion	25.63	20.4
CDX86573	Canola	mitochondrion	23.42	20.39
CDX99887	Canola	extracellular, plasma membrane	22.78	20.28
CDY02744	Canola	mitochondrion	14.87	20.17
CDY28820	Canola	cytosol	23.73	20.11
CDY23447	Canola	mitochondrion	12.34	19.9
CDX95813	Canola	mitochondrion	19.62	19.68
CDY50787	Canola	cytosol	19.94	19.44
CDX90232	Canola	mitochondrion	21.84	19.38
CDX83387	Canola	cytosol	22.15	19.34
CDX98187	Canola	mitochondrion	22.15	19.18
CDY51468	Canola	mitochondrion	21.52	18.89
CDY65207	Canola	mitochondrion	18.99	18.63
CDX95970	Canola	mitochondrion	21.52	18.38
CDY33565	Canola	plastid	21.2	17.63
CDY71779	Canola	mitochondrion	19.62	17.61
CDY15546	Canola	plastid	20.89	16.88
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	20.25	16.75
CDX92018	Canola	mitochondrion	20.57	16.62
CDX92019	Canola	mitochondrion	20.25	16.04
CDY41583	Canola	mitochondrion	10.76	14.72
CDX86572	Canola	mitochondrion	7.59	13.56
CDY10122	Canola	mitochondrion	25.95	11.31

Protein Annotations

EnsemblPlants:CDY35144	EnsemblPlantsGene:GSBRNA2T00058030001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDY35144	ProteinID:CDY35144.1	UniParc:UPI0004EEFB30	UniProt:A0A078HCE0	MapMan:35.2	:

Description

BnaA09g17810DBnaA09g17810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCE0]

Coordinates

chrLK032347:-:48091..49559

Molecular Weight (calculated)

36497.3 Da

IEP (calculated)

6.042

GRAVY (calculated)

-0.437

Length

316 amino acids

Sequence
(BLAST)

001: MSQLLSRVGK PLVCKNILRH NINVVRWCSS MPPYPYMLLD YMLNLADSWK DSSDGHITIG KCSSKQQKHI EIKTSVITDD VRNVMSLGYY NGALTLGMLE
101: KEYLTSTNNV RLYIKDREGS TTSSTLGLRD PKHCHKDQRF YVPTPGSDYF YSLDPNSKEN DHPEFVDMFP DYLPEEHLDH DADEINSCAT TVHFVEVASG
201: EQFFVKWFFK DQLEIDDKGL EQVTRRTRQF MVYRAEDHPR IEEHRKELSY TEDIGDFCIF LGQGEPFCVR ASMHPGLRAN YIYFSGYNLL TLVLMTSPTD
301: VAISFTLSYT IKGVYH

Best Arabidopsis Sequence Match ( AT5G46130.1 )
(BLAST)

001: MSQPLIRILN PLVYTNVLRK NNLVRWCSST PIYPFLLIDH LLKIGGSSNG SSSISRRSGS EGENEIIIKS KFLAGEVCEA MSMGLNQSGV NIHMKENTSL
101: RDMDNVRLNI YYKPSDPKSK SVSVHLPPLP KGSQIQNIAM TSLPDLKNDD WVVAIKFSVS QLMLYRHKDL RWINIETTHG HECICPYSSL KYSKKEQRFY
201: TSTPGGDWMC SFGLNFKEKD EPTYHIIDKK DLPQYMLYEL EEMNSFTRTD HLVESPSGEQ FLISWYYGDA FESDTVVHKT KRFLVFKEKE NAKRHKDMYY
301: TENIGDLCIF LGHGEPMCVP ASSSPGLKPN CIYFAGHNFG VYDITTQTIT LFYTEEGPLR STAFPYWPHP FSLTPT

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FNK9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.