Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- cytosol 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022669.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| AT5G53790.1 | Thale cress | cytosol | 56.84 | 55.79 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.21 | 39.27 |
| CDX86571 | Canola | cytosol | 8.85 | 38.37 |
| CDY59993 | Canola | cytosol, plastid | 27.35 | 37.36 |
| CDX99886 | Canola | cytosol | 20.38 | 34.86 |
| CDY23447 | Canola | mitochondrion | 17.96 | 34.18 |
| CDY51469 | Canola | mitochondrion | 32.71 | 33.33 |
| CDX90231 | Canola | mitochondrion | 32.71 | 33.33 |
| CDY47276 | Canola | mitochondrion | 32.71 | 33.15 |
| CDY10119 | Canola | mitochondrion | 32.44 | 32.88 |
| CDX86573 | Canola | mitochondrion | 31.9 | 32.78 |
| CDX95813 | Canola | mitochondrion | 27.35 | 32.38 |
| CDY57749 | Canola | mitochondrion | 30.29 | 32.1 |
| CDY27327 | Canola | cytosol | 15.01 | 31.82 |
| CDX98187 | Canola | mitochondrion | 30.83 | 31.51 |
| CDY65207 | Canola | mitochondrion | 27.08 | 31.37 |
| CDY10120 | Canola | mitochondrion | 28.42 | 31.36 |
| CDY57750 | Canola | plastid | 31.1 | 31.1 |
| CDX86572 | Canola | mitochondrion | 14.75 | 31.07 |
| CDX95667 | Canola | mitochondrion, plastid | 31.64 | 30.97 |
| CDY15545 | Canola | mitochondrion | 27.61 | 30.93 |
| CDY51468 | Canola | mitochondrion | 29.76 | 30.83 |
| CDY02744 | Canola | mitochondrion | 19.03 | 30.47 |
| CDX90232 | Canola | mitochondrion | 28.95 | 30.34 |
| CDY47275 | Canola | cytosol | 31.1 | 30.21 |
| CDX95970 | Canola | mitochondrion | 29.76 | 30.0 |
| CDY50787 | Canola | cytosol | 26.01 | 29.94 |
| CDY71779 | Canola | mitochondrion | 28.15 | 29.83 |
| CDY33565 | Canola | plastid | 30.29 | 29.74 |
| CDY43323 | Canola | mitochondrion | 29.49 | 29.57 |
| CDY65427 | Canola | cytosol | 15.28 | 29.53 |
| CDX99797 | Canola | plastid | 29.49 | 29.41 |
| CDX99796 | Canola | mitochondrion | 31.1 | 29.22 |
| CDX83388 | Canola | plastid | 29.76 | 28.98 |
| CDX99887 | Canola | extracellular, plasma membrane | 27.35 | 28.73 |
| CDX95668 | Canola | mitochondrion | 29.22 | 28.53 |
| CDX90173 | Canola | mitochondrion | 28.42 | 28.49 |
| CDX83387 | Canola | cytosol | 27.08 | 27.9 |
| CDY41583 | Canola | mitochondrion | 16.89 | 27.27 |
| CDX94769 | Canola | cytosol | 27.08 | 27.08 |
| CDX92018 | Canola | mitochondrion | 27.88 | 26.6 |
| CDY48999 | Canola | cytosol | 27.08 | 26.03 |
| CDY53420 | Canola | cytosol | 23.06 | 25.6 |
| CDY15546 | Canola | plastid | 26.81 | 25.58 |
| CDX92019 | Canola | mitochondrion | 26.81 | 25.06 |
| CDY35144 | Canola | mitochondrion | 20.11 | 23.73 |
| CDY03244 | Canola | cytosol | 15.55 | 22.75 |
| CDY10122 | Canola | mitochondrion | 32.44 | 16.69 |
Protein Annotations
| EnsemblPlants:CDY28820 | EnsemblPlantsGene:GSBRNA2T00041482001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDY28820 | ProteinID:CDY28820.1 | SEG:seg | UniParc:UPI0002546BF5 | UniProt:A0A078GQL0 | MapMan:35.2 |
Description
BnaA02g10120DBnaA02g10120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQL0]
Coordinates
chrLK032226:-:473917..475329
Molecular Weight (calculated)
42891.2 Da
IEP (calculated)
5.132
GRAVY (calculated)
-0.256
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLFNIVEK LFVQEGDKDR FFTCPRKTPY MLVDVTVGED ESSTDEENKI TDYWVYNPRS EKIINITGKK FPKVLSGGGL LLGGSRGWAI FMSYPDYTIH
101: LSQVFNPWCT ESSPKTITLP PLTDHLVPHV EMNGNVSLST YFPNQDDDYI VCFTIFGSKL CYCMPNRDSD WATIDIPFSY DIDSNVIYSQ KDQMFYLLAT
201: GCAYMAALDL KNNKKKPKFM RLQFENFPLI PQYEWEILAS CLQSGYIAES SSGERFIVQW YVVTVKLSNR EKLKESTKRF MVFRIEDDGG QLYQGTRIIA
301: NYTENIGDLC IFIGENETFC LEASKFPGLR PNSIYYVRYG FGVYDIGKKS SREYDLNGFP CIQGRTLFLS PLH
101: LSQVFNPWCT ESSPKTITLP PLTDHLVPHV EMNGNVSLST YFPNQDDDYI VCFTIFGSKL CYCMPNRDSD WATIDIPFSY DIDSNVIYSQ KDQMFYLLAT
201: GCAYMAALDL KNNKKKPKFM RLQFENFPLI PQYEWEILAS CLQSGYIAES SSGERFIVQW YVVTVKLSNR EKLKESTKRF MVFRIEDDGG QLYQGTRIIA
301: NYTENIGDLC IFIGENETFC LEASKFPGLR PNSIYYVRYG FGVYDIGKKS SREYDLNGFP CIQGRTLFLS PLH
001: MSLLFGLVAK HSVEESDAVR FCSYPRQTPY MLFNCSLGNV DRYSNITISY NIFNPRNEKI IKITDKVFVK SLPDPEQFVL LGTSRSWAAF TRIHDTIIFL
101: TDVFNPWSSE SSTRTITLPP LVSNGIKASV SLSTPSPDDD NDYIVSVSFF RSKLYYCMPN RDSEWTSTNI PFSCDFNSQV VYSRKRQMFY LLTTGCAYIA
201: ALDLKNNKDP TFLQIQFQNF PLIPQHEWEI LASCLRSDYI AESSSGERFI VQWYLTYVVE PWGNGNITKV FRETKRFMVF KEEEEHKFQR RKMIANYTEN
301: IGDLCIFIGR NETFCLEASK YPGLRRNSIY YTGHGFGVYD IRKKSFREYD SNLTKESKLS SISFIAKYQP VSTNRVLGFD
101: TDVFNPWSSE SSTRTITLPP LVSNGIKASV SLSTPSPDDD NDYIVSVSFF RSKLYYCMPN RDSEWTSTNI PFSCDFNSQV VYSRKRQMFY LLTTGCAYIA
201: ALDLKNNKDP TFLQIQFQNF PLIPQHEWEI LASCLRSDYI AESSSGERFI VQWYLTYVVE PWGNGNITKV FRETKRFMVF KEEEEHKFQR RKMIANYTEN
301: IGDLCIFIGR NETFCLEASK YPGLRRNSIY YTGHGFGVYD IRKKSFREYD SNLTKESKLS SISFIAKYQP VSTNRVLGFD
Arabidopsis Description
F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FHZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.