Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 7
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83387 | Canola | cytosol | 78.27 | 82.6 |
| AT4G16090.1 | Thale cress | mitochondrion | 46.6 | 66.42 |
| AT2G45930.1 | Thale cress | mitochondrion | 34.55 | 55.23 |
| CDX86571 | Canola | cytosol | 10.99 | 48.84 |
| CDX95667 | Canola | mitochondrion, plastid | 47.64 | 47.77 |
| CDX83388 | Canola | plastid | 47.64 | 47.52 |
| CDY10120 | Canola | mitochondrion | 39.27 | 44.38 |
| CDX90231 | Canola | mitochondrion | 39.79 | 41.53 |
| CDY51469 | Canola | mitochondrion | 39.79 | 41.53 |
| CDY47275 | Canola | cytosol | 41.62 | 41.41 |
| CDY57749 | Canola | mitochondrion | 37.17 | 40.34 |
| CDY47276 | Canola | mitochondrion | 38.22 | 39.67 |
| CDY50787 | Canola | cytosol | 33.51 | 39.51 |
| CDY65427 | Canola | cytosol | 19.9 | 39.38 |
| CDY57750 | Canola | plastid | 38.22 | 39.14 |
| CDY10119 | Canola | mitochondrion | 37.7 | 39.13 |
| CDX86573 | Canola | mitochondrion | 36.65 | 38.57 |
| CDX99797 | Canola | plastid | 37.7 | 38.5 |
| CDY15545 | Canola | mitochondrion | 33.51 | 38.44 |
| CDX90173 | Canola | mitochondrion | 37.17 | 38.17 |
| CDY43323 | Canola | mitochondrion | 36.91 | 37.9 |
| CDX98187 | Canola | mitochondrion | 35.86 | 37.53 |
| CDX99796 | Canola | mitochondrion | 38.74 | 37.28 |
| CDX99886 | Canola | cytosol | 21.2 | 37.16 |
| CDY51468 | Canola | mitochondrion | 34.29 | 36.39 |
| CDX90232 | Canola | mitochondrion | 33.77 | 36.24 |
| CDX99887 | Canola | extracellular, plasma membrane | 33.51 | 36.06 |
| CDY59993 | Canola | cytosol, plastid | 23.82 | 33.33 |
| CDX86572 | Canola | mitochondrion | 14.92 | 32.2 |
| CDY02744 | Canola | mitochondrion | 19.63 | 32.19 |
| CDX94769 | Canola | cytosol | 31.41 | 32.17 |
| CDY27327 | Canola | cytosol | 14.66 | 31.82 |
| CDY23447 | Canola | mitochondrion | 16.23 | 31.63 |
| CDX95813 | Canola | mitochondrion | 25.39 | 30.79 |
| CDY15546 | Canola | plastid | 31.15 | 30.43 |
| CDY65207 | Canola | mitochondrion | 25.65 | 30.43 |
| CDY48999 | Canola | cytosol | 30.1 | 29.64 |
| CDY53420 | Canola | cytosol | 25.92 | 29.46 |
| CDY28820 | Canola | cytosol | 28.53 | 29.22 |
| CDX95970 | Canola | mitochondrion | 25.92 | 26.76 |
| CDY71779 | Canola | mitochondrion | 24.61 | 26.7 |
| CDY03244 | Canola | cytosol | 17.8 | 26.67 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 26.44 | 26.44 |
| CDY33565 | Canola | plastid | 26.18 | 26.32 |
| CDY35144 | Canola | mitochondrion | 21.2 | 25.63 |
| CDX92018 | Canola | mitochondrion | 25.92 | 25.32 |
| CDX92019 | Canola | mitochondrion | 26.18 | 25.06 |
| CDY41583 | Canola | mitochondrion | 13.09 | 21.64 |
| CDY10122 | Canola | mitochondrion | 38.48 | 20.28 |
Protein Annotations
| EnsemblPlants:CDX95668 | EnsemblPlantsGene:GSBRNA2T00101554001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDX95668 | ProteinID:CDX95668.1 | SEG:seg | UniParc:UPI0004EE12DA | MapMan:35.2 | : |
Description
BnaC03g25490D
Coordinates
chrLK031890:-:557208..558492
Molecular Weight (calculated)
43309.4 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.366
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLLLNLS LRKLALRYQT HRMFSSSITT NPYLVYAKTI YGNPDDENLH VRSDIHYFDP VKEDEVIVRD KALPMEFRKE CFVVGMSHGW VVFKARSDDD
101: NNKDKVIYIS DYYSPCGSKS NPKTIPLHPM GQPNPAQQLG VTNAAMTCSP DQSNDFAVAV NCLGPVINFF RPGGKHKDSG SVFFTTPLQH FNQSKVMYSK
201: GDEKFYTTSV GGQFLLSYDA FFEEDMTGSE VHELRFINHP ELTQLEWEIL DSCSKTVHLV ESPSGERFLI KWYARNHQPG KEMTFLCRGT KRFMVFREEE
301: ETRVMSYTED IGDLCIFLGN SEPFCVKASS FPGLNPNSIY FAGDGFGVYD IATRKPRSFR PKSPGAFSTA SLAFHWIPPM SL
101: NNKDKVIYIS DYYSPCGSKS NPKTIPLHPM GQPNPAQQLG VTNAAMTCSP DQSNDFAVAV NCLGPVINFF RPGGKHKDSG SVFFTTPLQH FNQSKVMYSK
201: GDEKFYTTSV GGQFLLSYDA FFEEDMTGSE VHELRFINHP ELTQLEWEIL DSCSKTVHLV ESPSGERFLI KWYARNHQPG KEMTFLCRGT KRFMVFREEE
301: ETRVMSYTED IGDLCIFLGN SEPFCVKASS FPGLNPNSIY FAGDGFGVYD IATRKPRSFR PKSPGAFSTA SLAFHWIPPM SL
001: MSSLLLSLSS KASLRKLPLR CHTLRMFSSS TTNPYLLYRV INYGSSMDDI HVTSNIHYFD PVKEDEVIVR DKVLPMELRK GCLVGMSHGW GVFKAVCDYN
101: EYKAIYVTDY YNPCGSKSVK SIPLHPLGKP IAIQQQAITN AAMTCSPDQS KDFAVAVKCL GPMINFNRPG GTHKDSGSVI FKTPFQYFDQ SKVMYSKRDE
201: KFYTPSFGGH FLVFWDSFFG EDMTGSELVE LRFCNVPKLT QSEWELLDSC SKTVYLVESP SGQRFLIK
101: EYKAIYVTDY YNPCGSKSVK SIPLHPLGKP IAIQQQAITN AAMTCSPDQS KDFAVAVKCL GPMINFNRPG GTHKDSGSVI FKTPFQYFDQ SKVMYSKRDE
201: KFYTPSFGGH FLVFWDSFFG EDMTGSELVE LRFCNVPKLT QSEWELLDSC SKTVYLVESP SGQRFLIK
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45930.1); Has 76 Blast hits to 76 proteins in 2 spec /.../rchae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT4G16090]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.