Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35144 | Canola | mitochondrion | 50.59 | 40.82 |
| CDY53420 | Canola | cytosol | 40.0 | 30.36 |
| AT5G46140.1 | Thale cress | cytosol | 34.12 | 30.1 |
| AT5G46130.1 | Thale cress | mitochondrion | 41.18 | 27.93 |
| CDX94769 | Canola | cytosol | 35.69 | 24.4 |
| CDX99886 | Canola | cytosol | 20.0 | 23.39 |
| CDY48999 | Canola | cytosol | 34.51 | 22.68 |
| CDY51469 | Canola | mitochondrion | 31.37 | 21.86 |
| CDX90231 | Canola | mitochondrion | 31.37 | 21.86 |
| CDY10120 | Canola | mitochondrion | 28.63 | 21.6 |
| CDY57750 | Canola | plastid | 31.37 | 21.45 |
| CDY50787 | Canola | cytosol | 26.67 | 20.99 |
| CDY43323 | Canola | mitochondrion | 30.2 | 20.7 |
| CDX99796 | Canola | mitochondrion | 31.76 | 20.4 |
| CDY47275 | Canola | cytosol | 30.59 | 20.31 |
| CDY65427 | Canola | cytosol | 15.29 | 20.21 |
| CDY57749 | Canola | mitochondrion | 27.84 | 20.17 |
| CDX90173 | Canola | mitochondrion | 29.41 | 20.16 |
| CDX90232 | Canola | mitochondrion | 27.84 | 19.94 |
| CDY51468 | Canola | mitochondrion | 27.84 | 19.72 |
| CDX99887 | Canola | extracellular, plasma membrane | 27.06 | 19.44 |
| CDX86572 | Canola | mitochondrion | 13.33 | 19.21 |
| CDY59993 | Canola | cytosol, plastid | 20.39 | 19.05 |
| CDY10119 | Canola | mitochondrion | 27.45 | 19.02 |
| CDX99797 | Canola | plastid | 27.84 | 18.98 |
| CDX95667 | Canola | mitochondrion, plastid | 28.24 | 18.9 |
| CDY47276 | Canola | mitochondrion | 27.06 | 18.75 |
| CDX95813 | Canola | mitochondrion | 23.14 | 18.73 |
| CDX98187 | Canola | mitochondrion | 26.67 | 18.63 |
| CDY65207 | Canola | mitochondrion | 23.14 | 18.32 |
| CDX83388 | Canola | plastid | 27.45 | 18.28 |
| CDY15546 | Canola | plastid | 27.45 | 17.9 |
| CDX95668 | Canola | mitochondrion | 26.67 | 17.8 |
| CDY41583 | Canola | mitochondrion | 16.08 | 17.75 |
| CDX83387 | Canola | cytosol | 25.1 | 17.68 |
| CDX86573 | Canola | mitochondrion | 24.71 | 17.36 |
| CDY23447 | Canola | mitochondrion | 13.33 | 17.35 |
| CDX95970 | Canola | mitochondrion | 25.1 | 17.3 |
| CDY15545 | Canola | mitochondrion | 21.57 | 16.52 |
| CDY27327 | Canola | cytosol | 11.37 | 16.48 |
| CDY71779 | Canola | mitochondrion | 21.57 | 15.62 |
| CDY28820 | Canola | cytosol | 22.75 | 15.55 |
| CDY33565 | Canola | plastid | 23.14 | 15.53 |
| CDY02744 | Canola | mitochondrion | 13.73 | 15.02 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 22.35 | 14.92 |
| CDX92018 | Canola | mitochondrion | 21.96 | 14.32 |
| CDX86571 | Canola | cytosol | 4.31 | 12.79 |
| CDX92019 | Canola | mitochondrion | 19.61 | 12.53 |
| CDY10122 | Canola | mitochondrion | 29.41 | 10.34 |
Protein Annotations
| EnsemblPlants:CDY03244 | EnsemblPlantsGene:GSBRNA2T00115769001 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | ProteinID:CDY03244 | ProteinID:CDY03244.1 |
| UniParc:UPI0004EDBDA2 | MapMan:35.2 | : | : | : | : |
Description
BnaC09g19120D
Coordinates
chrLK031941:+:1074070..1075236
Molecular Weight (calculated)
29071.2 Da
IEP (calculated)
4.490
GRAVY (calculated)
-0.404
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTYPYMLLD YMLNLADSWK DSSDGHITIG KCSSKEQKHI EINTSDITAD VRNVMSIGYY IGALKVGMLE KEYLTSTNNV RLYIYYKPTD DTSKTTVRVR
101: LPHPPSGSVI QNIAMSSHPD LDNEDWVVAI KFNGPQIKLY RPACPTEPIT SSSLMYSKKD QRLYVPTPGS DYLYSLDPNS KENDHPEFVD MFPDYLPEEH
201: LDHDVDEMNS CATTVHFVDA ASGEQFFVKW FFKDQLEIDI GDFCIFLGQG EPFCV
101: LPHPPSGSVI QNIAMSSHPD LDNEDWVVAI KFNGPQIKLY RPACPTEPIT SSSLMYSKKD QRLYVPTPGS DYLYSLDPNS KENDHPEFVD MFPDYLPEEH
201: LDHDVDEMNS CATTVHFVDA ASGEQFFVKW FFKDQLEIDI GDFCIFLGQG EPFCV
001: MSQPLIRILN PLVYTNVLRK NNLVRWCSST PIYPFLLIDH LLKIGGSSNG SSSISRRSGS EGENEIIIKS KFLAGEVCEA MSMGLNQSGV NIHMKENTSL
101: RDMDNVRLNI YYKPSDPKSK SVSVHLPPLP KGSQIQNIAM TSLPDLKNDD WVVAIKFSVS QLMLYRHKDL RWINIETTHG HECICPYSSL KYSKKEQRFY
201: TSTPGGDWMC SFGLNFKEKD EPTYHIIDKK DLPQYMLYEL EEMNSFTRTD HLVESPSGEQ FLISWYYGDA FESDTVVHKT KRFLVFKEKE NAKRHKDMYY
301: TENIGDLCIF LGHGEPMCVP ASSSPGLKPN CIYFAGHNFG VYDITTQTIT LFYTEEGPLR STAFPYWPHP FSLTPT
101: RDMDNVRLNI YYKPSDPKSK SVSVHLPPLP KGSQIQNIAM TSLPDLKNDD WVVAIKFSVS QLMLYRHKDL RWINIETTHG HECICPYSSL KYSKKEQRFY
201: TSTPGGDWMC SFGLNFKEKD EPTYHIIDKK DLPQYMLYEL EEMNSFTRTD HLVESPSGEQ FLISWYYGDA FESDTVVHKT KRFLVFKEKE NAKRHKDMYY
301: TENIGDLCIF LGHGEPMCVP ASSSPGLKPN CIYFAGHNFG VYDITTQTIT LFYTEEGPLR STAFPYWPHP FSLTPT
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FNK9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.