CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000405.1-P	Field mustard	plastid	97.13	96.62
CDX95667	Canola	mitochondrion, plastid	84.07	84.51
AT2G45940.2	Thale cress	cytosol	62.66	65.75
AT4G16080.1	Thale cress	mitochondrion	59.79	64.69
CDX86571	Canola	cytosol	11.23	50.0
CDX95668	Canola	mitochondrion	47.52	47.64
CDX83387	Canola	cytosol	43.86	46.41
CDY57749	Canola	mitochondrion	39.95	43.47
CDY51469	Canola	mitochondrion	41.51	43.44
CDX90231	Canola	mitochondrion	41.51	43.44
CDY47276	Canola	mitochondrion	41.51	43.21
CDY10119	Canola	mitochondrion	41.51	43.21
CDY57750	Canola	plastid	42.04	43.16
CDY10120	Canola	mitochondrion	37.86	42.9
CDY50787	Canola	cytosol	35.77	42.28
CDY43323	Canola	mitochondrion	40.73	41.94
CDX99797	Canola	plastid	40.73	41.71
CDX98187	Canola	mitochondrion	39.43	41.37
CDX90173	Canola	mitochondrion	39.95	41.13
CDX90232	Canola	mitochondrion	37.6	40.45
CDY47275	Canola	cytosol	40.47	40.36
CDX86573	Canola	mitochondrion	38.12	40.22
CDY65427	Canola	cytosol	20.1	39.9
CDY51468	Canola	mitochondrion	37.34	39.72
CDX99887	Canola	extracellular, plasma membrane	36.55	39.44
CDX99796	Canola	mitochondrion	40.47	39.04
CDY15545	Canola	mitochondrion	33.94	39.04
CDX99886	Canola	cytosol	22.19	38.99
CDY15546	Canola	plastid	38.9	38.11
CDY59993	Canola	cytosol, plastid	27.15	38.1
CDX86572	Canola	mitochondrion	16.45	35.59
CDY23447	Canola	mitochondrion	17.75	34.69
CDY27327	Canola	cytosol	15.67	34.09
CDX95813	Canola	mitochondrion	27.15	33.02
CDY65207	Canola	mitochondrion	27.68	32.92
CDY02744	Canola	mitochondrion	19.58	32.19
CDX94769	Canola	cytosol	30.29	31.1
CDY48999	Canola	cytosol	30.29	29.9
CDY28820	Canola	cytosol	28.98	29.76
CDY71779	Canola	mitochondrion	26.89	29.26
CDX95970	Canola	mitochondrion	27.94	28.92
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.72	28.8
CDX92018	Canola	mitochondrion	28.98	28.39
CDY33565	Canola	plastid	27.94	28.16
CDY53420	Canola	cytosol	24.54	27.98
CDY41583	Canola	mitochondrion	16.71	27.71
CDY03244	Canola	cytosol	18.28	27.45
CDX92019	Canola	mitochondrion	28.46	27.32
CDY35144	Canola	mitochondrion	22.45	27.22
CDY10122	Canola	mitochondrion	44.65	23.59

Protein Annotations

EnsemblPlants:CDX83388	EnsemblPlantsGene:GSBRNA2T00138954001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDX83388	ProteinID:CDX83388.1	SEG:seg	UniParc:UPI0004EE5D45	MapMan:35.2	:

Description

BnaA03g21180D

Coordinates

chrLK031832:+:1296051..1297592

Molecular Weight (calculated)

43465.1 Da

IEP (calculated)

7.190

GRAVY (calculated)

-0.239

Length

383 amino acids

Sequence
(BLAST)

001: MSWSSSLLLS LSSKLSPRKL ALRCQTLRRF SSTTTTTNPN LFYRVSCCGE KGDVESPGVM TQLHMFDPAK EEHIIVGDMP FPKELVESSL VGSSHGWGVF
101: LWGHRSLLIT DFCNPLSFKS KPKFIPLLLR PDLIGCQAEL VSGVAMSSSP DEEEEDYLVA VKFTGRVVSI YKPSDTKAAL HYILPHNVFD HFEPSKLMYS
201: KRDQRFYMVS SGGHHLWSWD GLESTRPEFH ELRFHNLPQF SCSELQLLDS CHRTHHLVES PSGQRFLVKW YVQSSKALGF NCGGTKRFMV FREEEDMNMC
301: YTEDIGDLCI FLGDNEPFCV KASLFPGLNP NSIYFIGEAY GEGYGVYNIA TRTPRSFKPK PTSSGQGFMI RLWAPHWLPP FPL

Best Arabidopsis Sequence Match ( AT2G45940.2 )
(BLAST)

001: MFSSSSTTTN PYLMYYVTYS DEAPQAGAMT ELRMFDPAKE EYFTVHDKPL PKELVKSRLV GSSHGWGVFL GSPNSILISD YCNPSSSKSN PKMIPLPPRS
101: YEHSCQNELV SGVAMSSSPE EEDFVMAVKF TGRRVSIYRP GQHRKGNHRF SSTELFDYFE QANLMYSKRD QRFYMPSSGG HHLWSWDGII STDSQYHDLR
201: FHNLPQFSLS ELQLLRSCYR TQHLVESPSG QRFLVKWSVQ TLGRSVQSLA HRSVEFSFGG TKLFMVFREE EDMNMCYTQD IGDLCIFLGN NEPFCVKASS
301: FPGLNPNSIY FIGDRYGEGY GVYDIATRTP RSFNPKSFSA FSDLPNGQGY VLPNWLPHWI PPFPL

Arabidopsis Description

Protein of unknown function (DUF295) [Source:TAIR;Acc:AT2G45940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.