Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- plastid 2
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90232 | Canola | mitochondrion | 96.11 | 97.19 |
| Bra010792.1-P | Field mustard | cytosol | 47.22 | 96.05 |
| AT1G30160.2 | Thale cress | mitochondrion | 69.17 | 68.03 |
| CDX99886 | Canola | cytosol | 40.56 | 66.97 |
| CDY50787 | Canola | cytosol | 45.28 | 50.31 |
| CDX86571 | Canola | cytosol | 11.67 | 48.84 |
| CDX99797 | Canola | plastid | 50.0 | 48.13 |
| CDY57749 | Canola | mitochondrion | 46.39 | 47.44 |
| CDX90231 | Canola | mitochondrion | 47.22 | 46.45 |
| CDY10119 | Canola | mitochondrion | 47.22 | 46.2 |
| CDY47276 | Canola | mitochondrion | 46.94 | 45.92 |
| CDY51469 | Canola | mitochondrion | 46.67 | 45.9 |
| CDX86572 | Canola | mitochondrion | 22.22 | 45.2 |
| CDX98187 | Canola | mitochondrion | 45.56 | 44.93 |
| CDY10120 | Canola | mitochondrion | 40.83 | 43.49 |
| CDX99887 | Canola | extracellular, plasma membrane | 42.22 | 42.82 |
| CDY57750 | Canola | plastid | 43.06 | 41.55 |
| CDY43323 | Canola | mitochondrion | 42.78 | 41.4 |
| CDX90173 | Canola | mitochondrion | 42.22 | 40.86 |
| CDY15545 | Canola | mitochondrion | 36.94 | 39.94 |
| CDY15546 | Canola | plastid | 43.33 | 39.9 |
| CDY47275 | Canola | cytosol | 42.5 | 39.84 |
| CDX86573 | Canola | mitochondrion | 40.0 | 39.67 |
| CDX99796 | Canola | mitochondrion | 42.5 | 38.54 |
| CDX83388 | Canola | plastid | 39.72 | 37.34 |
| CDX95667 | Canola | mitochondrion, plastid | 39.44 | 37.27 |
| CDY59993 | Canola | cytosol, plastid | 26.94 | 35.53 |
| CDX95668 | Canola | mitochondrion | 36.39 | 34.29 |
| CDY65427 | Canola | cytosol | 18.33 | 34.2 |
| CDX83387 | Canola | cytosol | 32.78 | 32.6 |
| CDX95813 | Canola | mitochondrion | 26.94 | 30.79 |
| CDY27327 | Canola | cytosol | 15.0 | 30.68 |
| CDY02744 | Canola | mitochondrion | 19.44 | 30.04 |
| CDX94769 | Canola | cytosol | 31.11 | 30.03 |
| CDY28820 | Canola | cytosol | 30.83 | 29.76 |
| CDY23447 | Canola | mitochondrion | 16.11 | 29.59 |
| CDY48999 | Canola | cytosol | 31.67 | 29.38 |
| CDY65207 | Canola | mitochondrion | 26.11 | 29.19 |
| CDY53420 | Canola | cytosol | 26.11 | 27.98 |
| CDY03244 | Canola | cytosol | 19.72 | 27.84 |
| CDX95970 | Canola | mitochondrion | 27.78 | 27.03 |
| CDY71779 | Canola | mitochondrion | 25.83 | 26.42 |
| CDY28818 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.22 | 25.65 |
| CDY33565 | Canola | plastid | 26.67 | 25.26 |
| CDY41583 | Canola | mitochondrion | 16.11 | 25.11 |
| CDX92018 | Canola | mitochondrion | 27.22 | 25.06 |
| CDY10122 | Canola | mitochondrion | 48.06 | 23.86 |
| CDX92019 | Canola | mitochondrion | 25.28 | 22.81 |
| CDY35144 | Canola | mitochondrion | 18.89 | 21.52 |
Protein Annotations
| EnsemblPlants:CDY51468 | EnsemblPlantsGene:GSBRNA2T00003526001 | InterPro:DUF295 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF3 | PFAM:PF03478 |
| ProteinID:CDY51468 | ProteinID:CDY51468.1 | UniParc:UPI0004EDE77A | UniProt:A0A078IQX3 | MapMan:35.2 | : |
Description
BnaC03g59090DBnaC03g59090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQX3]
Coordinates
chrLK032998:+:40374..41941
Molecular Weight (calculated)
41322.4 Da
IEP (calculated)
7.351
GRAVY (calculated)
-0.416
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRLLFKLSP LIYKSGSVRT FSSSTTGPCT PMCMIMSPSP NGNVGEALLF NVDSCELVRS PEKAFPKELY KATLVGTSRG WGMFSNRLDR SAVISDFLNP
101: YASKSEPKVI PLPPFTTIPT YQTEVVCNMA MSSSPEPYDK DWVVGIKFLG KQLSFCRPHL DLRWTNIPTP FESWDTSKLM YSKKDQRFNL LAPGGNYLCS
201: WDHDFNKDKK PKFHELVLHN LPSMPHEQQQ RLDSNCREDH WVESPSGESF LVKWFSEYTP EGCKVPIVMV FREEDTKDGR KNMHYTDDIG DMCIFISKSE
301: DFCVKACSFR GLNPNSIFLN GRLFVSLNMS KFSCRLYEYP EDTPYTIPYS PYWLPPFSSY
101: YASKSEPKVI PLPPFTTIPT YQTEVVCNMA MSSSPEPYDK DWVVGIKFLG KQLSFCRPHL DLRWTNIPTP FESWDTSKLM YSKKDQRFNL LAPGGNYLCS
201: WDHDFNKDKK PKFHELVLHN LPSMPHEQQQ RLDSNCREDH WVESPSGESF LVKWFSEYTP EGCKVPIVMV FREEDTKDGR KNMHYTDDIG DMCIFISKSE
301: DFCVKACSFR GLNPNSIFLN GRLFVSLNMS KFSCRLYEYP EDTPYTIPYS PYWLPPFSSY
001: MSRLLSKLSP LIHKSSRNIR SFSSSTTGPC VSICTVVEPS PDGNLGQVLL FNIPDMKLVT ADKIYPDELY DAQLVGASHG WGLFSDRTNR SALISDYLNP
101: YASKSKPKMI HLPFFTPMYS GQTEVVCNVA MSSPPPDQDD DHEDWVVGIK FLGRQLSLCR PRHDLRWTNI LTPFESWEVS ELMYSKKDQR FYLLAPGGNY
201: LCSWDLNFKE DKKPKFHELV LHNLPNMPRS LWKQLDSYGR EDHWVESPSG ESFLVKWFCE YSPENTSNWC KSPIVMVFRE EETKDGRKNM RYTDDIGDLC
301: IFISKGEDFC VKASSCPGLQ PNSISLHGRL FAILNLTKRT MGCYEYPQGI PKRIPYLPYW LPPFSP
101: YASKSKPKMI HLPFFTPMYS GQTEVVCNVA MSSPPPDQDD DHEDWVVGIK FLGRQLSLCR PRHDLRWTNI LTPFESWEVS ELMYSKKDQR FYLLAPGGNY
201: LCSWDLNFKE DKKPKFHELV LHNLPNMPRS LWKQLDSYGR EDHWVESPSG ESFLVKWFCE YSPENTSNWC KSPIVMVFRE EETKDGRKNM RYTDDIGDLC
301: IFISKGEDFC VKASSCPGLQ PNSISLHGRL FAILNLTKRT MGCYEYPQGI PKRIPYLPYW LPPFSP
Arabidopsis Description
At1g30160 [Source:UniProtKB/TrEMBL;Acc:Q6DBP6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.