Factsheet for Bra010792.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010791.1-P	Field mustard	mitochondrion	98.31	48.88
CDY51468	Canola	mitochondrion	96.05	47.22
AT1G30160.2	Thale cress	mitochondrion	75.14	36.34
Bra032294.1-P	Field mustard	cytosol	54.8	29.94
Bra015433.1-P	Field mustard	mitochondrion	54.8	26.36
Bra030615.1-P	Field mustard	mitochondrion	52.54	25.69
Bra015434.1-P	Field mustard	cytosol	44.07	22.81
Bra010793.1-P	Field mustard	mitochondrion	45.76	22.13
Bra010846.1-P	Field mustard	mitochondrion	46.33	22.04
Bra000405.1-P	Field mustard	plastid	43.5	20.0
Bra020431.1-P	Field mustard	mitochondrion	38.98	19.11
Bra030614.1-P	Field mustard	mitochondrion	37.29	18.7
Bra033734.1-P	Field mustard	cytosol	40.68	18.56
Bra017579.1-P	Field mustard	cytosol	29.94	18.53
Bra000406.1-P	Field mustard	cytosol	37.85	18.51
Bra040901.1-P	Field mustard	mitochondrion	35.59	17.4
Bra022669.1-P	Field mustard	cytosol	35.03	16.62
Bra039286.1-P	Field mustard	mitochondrion	30.51	15.56
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	31.64	14.66
Bra004352.1-P	Field mustard	mitochondrion	27.68	13.17

Protein Annotations

EnsemblPlants:Bra010792.1	EnsemblPlants:Bra010792.1-P	EnsemblPlantsGene:Bra010792	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI0002546F20	UniProt:M4D2T9	MapMan:35.2	:	:

Description

AT1G30160 (E=2e-076) | unknown protein

Coordinates

chrA08:+:16470491..16471096

Molecular Weight (calculated)

20815.6 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.673

Length

177 amino acids

Sequence
(BLAST)

001: MYSKKDQRFN LLAPGGNYLC SWDHDKKPKF HELVLHNLPS MPREQQQRLD SNCREDHWVE SPSGESFLVK WFSEYTPEGC KVPMVMVFRE EDTKDGRKNM
101: HYTDDIGDMC IFISKSEDFC VKASSCRGLN PNSIFLNGRL FVSLNMSKFS CRLYEYPEDT PYTIPYSPYW LPPFSSY

Best Arabidopsis Sequence Match ( AT1G05540.1 )
(BLAST)

001: MSQLLFRLSK LSSRNNELIH KSVRLFSTSP YLTLGSVVED LPEEDGSYIG DILLFDPAKE ELVTVRDKTI PEKLVNSRVV GASHGWTFFS DRCNHNSVCI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI

Arabidopsis Description

T25N20.19 [Source:UniProtKB/TrEMBL;Acc:Q9ZVY4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.