Factsheet for Bra032294.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 3
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50787	Canola	cytosol	97.22	97.22
Bra010792.1-P	Field mustard	cytosol	29.94	54.8
Bra015433.1-P	Field mustard	mitochondrion	53.4	47.01
Bra030615.1-P	Field mustard	mitochondrion	52.47	46.96
Bra015434.1-P	Field mustard	cytosol	49.38	46.78
Bra010791.1-P	Field mustard	mitochondrion	51.23	46.63
Bra030614.1-P	Field mustard	mitochondrion	47.22	43.34
Bra010793.1-P	Field mustard	mitochondrion	48.77	43.17
Bra010846.1-P	Field mustard	mitochondrion	46.91	40.86
Bra000405.1-P	Field mustard	plastid	41.98	35.32
Bra000406.1-P	Field mustard	cytosol	38.89	34.81
Bra020431.1-P	Field mustard	mitochondrion	34.88	31.3
Bra040901.1-P	Field mustard	mitochondrion	31.48	28.18
Bra033734.1-P	Field mustard	cytosol	33.64	28.09
Bra039286.1-P	Field mustard	mitochondrion	28.7	26.8
Bra022669.1-P	Field mustard	cytosol	29.94	26.01
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.32	24.87
Bra004352.1-P	Field mustard	mitochondrion	26.85	23.39
Bra017579.1-P	Field mustard	cytosol	18.83	21.33

Protein Annotations

EnsemblPlants:Bra032294.1	EnsemblPlants:Bra032294.1-P	EnsemblPlantsGene:Bra032294	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI00025426B0	UniProt:M4EU12	MapMan:35.2	:	:

Description

AT1G05540 (E=1e-107) | unknown protein

Coordinates

chrA09:+:22776943..22778008

Molecular Weight (calculated)

36904.2 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.137

Length

324 amino acids

Sequence
(BLAST)

001: MVGDVHLFDA ATEGLVTVAD KTIPEEIVNG GIVVGASHGW LFFKDRHDHS VYVTDFYNSL AFKTNATMVP MPTFTALHHC QTEVVWNVAM STSPGQQEDE
101: DDWVVGIKFL GNQLSFCRPR RDLRWTNVSA PFKIFNNSNL MFSKRDKTFK LPAPVGNYLC SWDIQFHKDE YPAPKIHKLL FHNLPQLPLS MWELLDSCPR
201: EDHWVESPSG ESFLVKWYSR VSLSPSLSTL PIVMVFREED RKDGIIKMCY TEDIGDICIF LSKSEAFCVP ASSCPGLKPN SIYVADRVFS VYDLTTKTFH
301: HFKYPIDAPE KISRVPCWLP PVSV

Best Arabidopsis Sequence Match ( AT1G05540.1 )
(BLAST)

001: MSQLLFRLSK LSSRNNELIH KSVRLFSTSP YLTLGSVVED LPEEDGSYIG DILLFDPAKE ELVTVRDKTI PEKLVNSRVV GASHGWTFFS DRCNHNSVCI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI

Arabidopsis Description

T25N20.19 [Source:UniProtKB/TrEMBL;Acc:Q9ZVY4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.