Factsheet for Bra030615.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15546	Canola	plastid	91.16	84.4
AT1G05540.1	Thale cress	mitochondrion	68.23	67.3
Bra015433.1-P	Field mustard	mitochondrion	63.26	62.23
Bra010792.1-P	Field mustard	cytosol	25.69	52.54
Bra032294.1-P	Field mustard	cytosol	46.96	52.47
Bra015434.1-P	Field mustard	cytosol	47.51	50.29
Bra030614.1-P	Field mustard	mitochondrion	47.51	48.73
Bra010791.1-P	Field mustard	mitochondrion	47.51	48.31
Bra010793.1-P	Field mustard	mitochondrion	46.13	45.63
Bra010846.1-P	Field mustard	mitochondrion	45.03	43.82
Bra000405.1-P	Field mustard	plastid	42.82	40.26
Bra020431.1-P	Field mustard	mitochondrion	38.67	38.78
Bra000406.1-P	Field mustard	cytosol	34.53	34.53
Bra040901.1-P	Field mustard	mitochondrion	33.98	33.98
Bra039286.1-P	Field mustard	mitochondrion	31.77	33.14
Bra004352.1-P	Field mustard	mitochondrion	31.22	30.38
Bra022669.1-P	Field mustard	cytosol	30.66	29.76
Bra033734.1-P	Field mustard	cytosol	30.94	28.87
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.01	27.49
Bra017579.1-P	Field mustard	cytosol	17.13	21.68

Protein Annotations

EnsemblPlants:Bra030615.1	EnsemblPlants:Bra030615.1-P	EnsemblPlantsGene:Bra030615	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI00025454EB	UniProt:M4EP95	MapMan:35.2	:	:

Description

AT1G05540 (E=4e-139) | unknown protein

Coordinates

chrA08:+:21071453..21072862

Molecular Weight (calculated)

40796.1 Da

IEP (calculated)

7.268

GRAVY (calculated)

-0.182

Length

362 amino acids

Sequence
(BLAST)

001: MSQLLFRLKL SSRNKNVFKQ KSVRLFSTSP CLSLCCVWDD ALGLVEGGSY IGKVLFFDPA KNEILQVPDK TIPQELLNSK PIGASQGWGF SSEQSNHNSL
101: HITDLFNPLA ASKSNTKMIP LPPLTSMLYG QTKVVWNVAM SSSSPHEEDC VVAIKFFGRQ LSMCKPGRDL AWTNRLIPFD RAENSNLMYS KRDQRFYLPA
201: PGGNYLCSWD LHFDNDPKFN ELVFPNFPNL PQSTWEDLDS CIREDHWVES PSGQSFLVKR YSRVGSKAPM VMVLVFREED QVTAKGTRNM CYTQDIGDLC
301: IFLSKNDPFC VVASSCPGLK PNSIYMMDHC VSICELANGT VTCFELPKMM PFSPFWIPPC SV

Best Arabidopsis Sequence Match ( AT1G05540.1 )
(BLAST)

001: MSQLLFRLSK LSSRNNELIH KSVRLFSTSP YLTLGSVVED LPEEDGSYIG DILLFDPAKE ELVTVRDKTI PEKLVNSRVV GASHGWTFFS DRCNHNSVCI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI

Arabidopsis Description

T25N20.19 [Source:UniProtKB/TrEMBL;Acc:Q9ZVY4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.