Factsheet for Bra010791.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90232	Canola	mitochondrion	100.0	100.0
Bra010792.1-P	Field mustard	cytosol	48.88	98.31
AT1G30160.2	Thale cress	mitochondrion	69.66	67.76
Bra032294.1-P	Field mustard	cytosol	46.63	51.23
Bra030615.1-P	Field mustard	mitochondrion	48.31	47.51
Bra015433.1-P	Field mustard	mitochondrion	48.88	47.28
Bra010793.1-P	Field mustard	mitochondrion	47.19	45.9
Bra015434.1-P	Field mustard	cytosol	42.13	43.86
Bra010846.1-P	Field mustard	mitochondrion	42.7	40.86
Bra030614.1-P	Field mustard	mitochondrion	40.17	40.51
Bra000405.1-P	Field mustard	plastid	40.17	37.14
Bra020431.1-P	Field mustard	mitochondrion	34.83	34.35
Bra000406.1-P	Field mustard	cytosol	32.87	32.32
Bra040901.1-P	Field mustard	mitochondrion	31.46	30.94
Bra033734.1-P	Field mustard	cytosol	32.02	29.38
Bra022669.1-P	Field mustard	cytosol	30.34	28.95
Bra039286.1-P	Field mustard	mitochondrion	28.09	28.82
Bra004352.1-P	Field mustard	mitochondrion	27.25	26.08
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.81	25.92
Bra017579.1-P	Field mustard	cytosol	17.42	21.68

Protein Annotations

EnsemblPlants:Bra010791.1	EnsemblPlants:Bra010791.1-P	EnsemblPlantsGene:Bra010791	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	SEG:seg	UniParc:UPI0002546F1F	UniProt:M4D2T8	MapMan:35.2	:

Description

AT1G30160 (E=6e-140) | unknown protein

Coordinates

chrA08:+:16469708..16471096

Molecular Weight (calculated)

40924.9 Da

IEP (calculated)

7.351

GRAVY (calculated)

-0.442

Length

356 amino acids

Sequence
(BLAST)

001: MPRLLFKLSP LIYKSRSVRT FSSSTTGPCT PMCMIMSPSP NGNVGEALLF DVDSCELVRS PEKAFPKELY NATLVGTSRG WGMFSNRLDR SAVISDFLNP
101: YASKSEPKVV PLPPFTTMHT YQTEVVCNMA MSSSPEPYDK DWVVGIKFLG KQLSFCRPHL DLRWTNIPTP FESWDTSKLM YSKKDQRFNL LAPGGNYLCS
201: WDHDKKPKFH ELVLHNLPSM PREQQQRLDS NCREDHWVES PSGESFLVKW FSEYTPEGCK VPMVMVFREE DTKDGRKNMH YTDDIGDMCI FISKSEDFCV
301: KASSCRGLNP NSIFLNGRLF VSLNMSKFSC RLYEYPEDTP YTIPYSPYWL PPFSSY

Best Arabidopsis Sequence Match ( AT1G30160.2 )
(BLAST)

001: MSRLLSKLSP LIHKSSRNIR SFSSSTTGPC VSICTVVEPS PDGNLGQVLL FNIPDMKLVT ADKIYPDELY DAQLVGASHG WGLFSDRTNR SALISDYLNP
101: YASKSKPKMI HLPFFTPMYS GQTEVVCNVA MSSPPPDQDD DHEDWVVGIK FLGRQLSLCR PRHDLRWTNI LTPFESWEVS ELMYSKKDQR FYLLAPGGNY
201: LCSWDLNFKE DKKPKFHELV LHNLPNMPRS LWKQLDSYGR EDHWVESPSG ESFLVKWFCE YSPENTSNWC KSPIVMVFRE EETKDGRKNM RYTDDIGDLC
301: IFISKGEDFC VKASSCPGLQ PNSISLHGRL FAILNLTKRT MGCYEYPQGI PKRIPYLPYW LPPFSP

Arabidopsis Description

At1g30160 [Source:UniProtKB/TrEMBL;Acc:Q6DBP6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.