Factsheet for Bra030614.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15545	Canola	mitochondrion	91.22	96.7
Bra015434.1-P	Field mustard	cytosol	61.47	63.45
AT1G05550.3	Thale cress	cytosol	61.76	56.62
Bra015433.1-P	Field mustard	mitochondrion	49.58	47.55
Bra030615.1-P	Field mustard	mitochondrion	48.73	47.51
Bra010793.1-P	Field mustard	mitochondrion	49.01	47.27
Bra032294.1-P	Field mustard	cytosol	43.34	47.22
Bra010846.1-P	Field mustard	mitochondrion	48.73	46.24
Bra010791.1-P	Field mustard	mitochondrion	40.51	40.17
Bra010792.1-P	Field mustard	cytosol	18.7	37.29
Bra020431.1-P	Field mustard	mitochondrion	37.39	36.57
Bra000406.1-P	Field mustard	cytosol	37.11	36.19
Bra000405.1-P	Field mustard	plastid	39.09	35.84
Bra040901.1-P	Field mustard	mitochondrion	34.56	33.7
Bra022669.1-P	Field mustard	cytosol	32.58	30.83
Bra039286.1-P	Field mustard	mitochondrion	29.75	30.26
Bra004352.1-P	Field mustard	mitochondrion	31.44	29.84
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.59	28.27
Bra033734.1-P	Field mustard	cytosol	30.88	28.09
Bra017579.1-P	Field mustard	cytosol	18.41	22.73

Protein Annotations

EnsemblPlants:Bra030614.1	EnsemblPlants:Bra030614.1-P	EnsemblPlantsGene:Bra030614	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	SEG:seg	UniParc:UPI00025454EC	UniProt:M4EP94	MapMan:35.2	:

Description

AT1G05540 (E=6e-086) | unknown protein

Coordinates

chrA08:-:21073389..21074752

Molecular Weight (calculated)

40059.6 Da

IEP (calculated)

6.633

GRAVY (calculated)

-0.328

Length

353 amino acids

Sequence
(BLAST)

001: MSRRIIRLSK LSSRNNNVFI QKCVRFFSTG PYLTLGCNTG DVLLFDPAKE QIVSLRGKTI PKELKDEEMI GASHGWGFFY DRRDLSVRVS DIFNPLASKS
101: SPTVIHLPRL TDLPSEQIEQ VCNVAMSSPS PLGDEDCVVA IKFSGDQLSL CRPGRDLEWT NTSTPSHCCE NSNVMYSKRY KRFYLSAPGG IHFFSYHLND
201: ENIEHHKLVY RDHPELDQSE WMTLSMCSRR EYLVESSSSD ERYLVKWYAH GSYSSVLNGI DYKTKRFMVF REEETAEGKL MCYTEDIGEM CIFIASNETF
301: CIPASSCPGL KPSTIYFMGH GFGSYDLTTG DTHHYKAPGG VITTPCWIPL VSI

Best Arabidopsis Sequence Match ( AT1G05550.3 )
(BLAST)

001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI

Arabidopsis Description

Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.