Factsheet for Bra015434.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47275	Canola	cytosol	98.54	87.76
Bra030614.1-P	Field mustard	mitochondrion	63.45	61.47
Bra010846.1-P	Field mustard	mitochondrion	54.09	49.73
Bra015433.1-P	Field mustard	mitochondrion	53.22	49.46
Bra032294.1-P	Field mustard	cytosol	46.78	49.38
Bra010793.1-P	Field mustard	mitochondrion	51.17	47.81
Bra030615.1-P	Field mustard	mitochondrion	50.29	47.51
Bra010792.1-P	Field mustard	cytosol	22.81	44.07
Bra000406.1-P	Field mustard	cytosol	44.74	42.27
Bra010791.1-P	Field mustard	mitochondrion	43.86	42.13
Bra000405.1-P	Field mustard	plastid	42.69	37.92
Bra020431.1-P	Field mustard	mitochondrion	39.47	37.4
Bra040901.1-P	Field mustard	mitochondrion	38.01	35.91
Bra039286.1-P	Field mustard	mitochondrion	34.8	34.29
Bra033734.1-P	Field mustard	cytosol	35.38	31.19
Bra022669.1-P	Field mustard	cytosol	33.04	30.29
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.04	29.58
Bra004352.1-P	Field mustard	mitochondrion	30.99	28.49
Bra017579.1-P	Field mustard	cytosol	23.1	27.62

Protein Annotations

EnsemblPlants:Bra015434.1	EnsemblPlants:Bra015434.1-P	EnsemblPlantsGene:Bra015434	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI0002543720	UniProt:M4DG11	MapMan:35.2	:	:

Description

AT1G05540 (E=2e-099) | unknown protein

Coordinates

chrA10:-:1792962..1794076

Molecular Weight (calculated)

38648.9 Da

IEP (calculated)

5.106

GRAVY (calculated)

-0.246

Length

342 amino acids

Sequence
(BLAST)

001: MIHESARLFS TSPYLTLGTR VKEVLPGGCK IADVLLFDPA EEELVTVPDK TVPKELMDEE MVGASHGWGV FCARHDRSVR ISDLYNPLAS KSNPTMITLP
101: RLTALSSNYC NVAMTSSPHL EDCVVAIKFV GDHLSLCRPG RDLEWTNILT PPSCLENSNL MYSKRDQKFY LPAPGGKYLF SYHLHSKEED FPEVQEVVYR
201: GHPELDQSEW ELLSSCTRTE HLVESPFSDE RFLVKWYAHG FYSSVLERID HITKRFMVFR EEETTQGSIM CYTEDIGDMC IFLANSEAFC VPASSCTGLK
301: PNSIYHMGRG LGFYDLTTGN PHQYLAPDGV PTLSYWLPPF ST

Best Arabidopsis Sequence Match ( AT1G05550.3 )
(BLAST)

001: MAEVEPAAPS QPKNRKLATV LSIMLCNKLC RLTLFDRKCV LAFKMRWSMK RRLASTLTNL IGIQKSIRLF STSPYLTLGT RVKKILPAGC KIGDVLLFDP
101: TKEEIVTVPD KTIPEELMDE EMMGASHGWG FFCDRTDRSV RISDIFNPLA SKTNPVMIPL PRLTALPTGQ TEKVFNVAMS SSSPLGEEDC VVAIKFSGIQ
201: LSLCRPGCDL EWTNIVTPFN CLDTTQVSYD SPGLHELFYR DHPVLDQSEW ELLSSCSRTE YLVESPSGGD RFLVKWYALG FFSSNLKGIY HKTKGLMVFR
301: EEETTEGKIM CYTEDIGDMC IFLASNEAFC IPASSCLGLK PNCVYYMGRG FGFYDLTTGE AHHYKAPKGA PSALTAPYWL PPFAI

Arabidopsis Description

Protein of unknown function (DUF295) [Source:TAIR;Acc:AT1G05550]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.