Factsheet for Bra015433.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47276	Canola	mitochondrion	99.73	99.73
AT1G05540.1	Thale cress	mitochondrion	72.83	73.02
Bra030615.1-P	Field mustard	mitochondrion	62.23	63.26
Bra010792.1-P	Field mustard	cytosol	26.36	54.8
Bra032294.1-P	Field mustard	cytosol	47.01	53.4
Bra015434.1-P	Field mustard	cytosol	49.46	53.22
Bra030614.1-P	Field mustard	mitochondrion	47.55	49.58
Bra010791.1-P	Field mustard	mitochondrion	47.28	48.88
Bra010846.1-P	Field mustard	mitochondrion	45.65	45.16
Bra010793.1-P	Field mustard	mitochondrion	44.29	44.54
Bra000405.1-P	Field mustard	plastid	43.21	41.3
Bra020431.1-P	Field mustard	mitochondrion	38.04	38.78
Bra000406.1-P	Field mustard	cytosol	37.77	38.4
Bra040901.1-P	Field mustard	mitochondrion	33.15	33.7
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.97	32.72
Bra022669.1-P	Field mustard	cytosol	33.15	32.71
Bra033734.1-P	Field mustard	cytosol	32.88	31.19
Bra004352.1-P	Field mustard	mitochondrion	31.52	31.18
Bra039286.1-P	Field mustard	mitochondrion	29.08	30.84
Bra017579.1-P	Field mustard	cytosol	17.66	22.73

Protein Annotations

EnsemblPlants:Bra015433.1	EnsemblPlants:Bra015433.1-P	EnsemblPlantsGene:Bra015433	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	UniParc:UPI0002543721	UniProt:M4DG10	MapMan:35.2	:	:

Description

AT1G05540 (E=1e-160) | unknown protein

Coordinates

chrA10:-:1796475..1797887

Molecular Weight (calculated)

41724.8 Da

IEP (calculated)

6.179

GRAVY (calculated)

-0.201

Length

368 amino acids

Sequence
(BLAST)

001: MSQLLFRLSK LSSRNNNVLI HKKSSRFLST SPYLILGVFG DDFRSACGNF LSDILLFDPA KEELLTVRDK AVPEELVCSQ VMGASHGWGF FSGHNAIHIS
101: DTFSPLASKS DSKVIALPPI TSMIYGQSEV VWNVAMSSSS PYRQDNEEGD CVVAIKFLGN HLTMCRPGRD LGWTNKLIPF VSFENSNLMY SKREQRFSLP
201: APGGNYLCSW DLHFENEPKF TELVFRNIPQ LPQSEWELMD SCFKEDHWVE SPCGQSFLVK WYSHVPSIRC KEPMVMVFRE DQDTNEGTKT MSYTEDIGDL
301: CIFLSKSEPF CVVASSCPGL KPNSIYLMGH SFAVYDITTR TSRHFERPKG LPESLTTFLP YWLAPFSM

Best Arabidopsis Sequence Match ( AT1G05540.1 )
(BLAST)

001: MSQLLFRLSK LSSRNNELIH KSVRLFSTSP YLTLGSVVED LPEEDGSYIG DILLFDPAKE ELVTVRDKTI PEKLVNSRVV GASHGWTFFS DRCNHNSVCI
101: SDLFTPMASK SNTKIIPLPL LTTMIYGQTE AVWNVAMSSS SPHQDNEEED CVVAINFLGS QLSVCRPGRD HGWTNKQIPF ICSENSNLMY SKRDQRFYLP
201: APGGNYLCSW DLHFDNDPKF NELVFLNLPE LPQSEWELLN SCFKEDHWVE SPSGQSFLVK WYSHIPSQRY KDPILMVLRE DEETEEGTRN MCYTEDIGDL
301: CIFLSKSDPF CVVASSCPGL KPNSIYLMGR CFAVYDLTTR TARHFKAPKG GPERVPFLPY WLPPFSI

Arabidopsis Description

T25N20.19 [Source:UniProtKB/TrEMBL;Acc:Q9ZVY4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.