Factsheet for Bra004352.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33565	Canola	plastid	88.71	86.84
AT1G68960.1	Thale cress	mitochondrion	72.58	71.81
Bra039286.1-P	Field mustard	mitochondrion	36.29	38.9
Bra020431.1-P	Field mustard	mitochondrion	33.6	34.63
Bra015433.1-P	Field mustard	mitochondrion	31.18	31.52
Bra030614.1-P	Field mustard	mitochondrion	29.84	31.44
Bra030615.1-P	Field mustard	mitochondrion	30.38	31.22
Bra040901.1-P	Field mustard	mitochondrion	30.38	31.22
Bra015434.1-P	Field mustard	cytosol	28.49	30.99
Bra010846.1-P	Field mustard	mitochondrion	30.38	30.38
Bra022669.1-P	Field mustard	cytosol	30.38	30.29
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.84	29.06
Bra000406.1-P	Field mustard	cytosol	28.23	29.01
Bra010793.1-P	Field mustard	mitochondrion	27.42	27.87
Bra010792.1-P	Field mustard	cytosol	13.17	27.68
Bra000405.1-P	Field mustard	plastid	28.49	27.53
Bra010791.1-P	Field mustard	mitochondrion	26.08	27.25
Bra032294.1-P	Field mustard	cytosol	23.39	26.85
Bra033734.1-P	Field mustard	cytosol	23.12	22.16
Bra017579.1-P	Field mustard	cytosol	15.86	20.63

Protein Annotations

EnsemblPlants:Bra004352.1	EnsemblPlants:Bra004352.1-P	EnsemblPlantsGene:Bra004352	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	SEG:seg	UniParc:UPI00025417CA	UniProt:M4CJG8	MapMan:35.2	:

Description

AT1G68960 (E=1e-140) | unknown protein

Coordinates

chrA07:+:18169689..18171160

Molecular Weight (calculated)

41635.9 Da

IEP (calculated)

7.132

GRAVY (calculated)

-0.491

Length

372 amino acids

Sequence
(BLAST)

001: MSHLFRRVSK NLSSFPTRSL SSRRSNFSTA TPPYLLLGSD IVGDSPCGGK LVNFNLYDPK TQKHVKIENQ TLTKELNESK WIGSSRGWLA SMNKNDSTVH
101: LSNPSKKKTI SLPPLTRDKF EHLVNVSVSS SDCCVVAVKF YGSRVSLCRL GDSEWTRVDV PCPSFHSSTV IYSERDERFY LNNCNPDYTG PTDLTPTSNP
201: GLLTPVSGYM RFPFSNFLEE MPEQEEETCL SRFKIQQQLV QSSSGQSFIV CWFVERFTDR GEAAPWGDTS YNNNNKEGLC KKTHKIMVFR QDEEQRLGPH
301: TDDIGDLCIF LGDNEAFCLS AKDYPGLNPN SVYFGGHGSG FGICDLATRT ISYLSDSPPP SGRMFWIPPS SA

Best Arabidopsis Sequence Match ( AT1G68960.1 )
(BLAST)

001: MSQLLCRISK LSTSRNRILC FRRSEFSTVT AEATTPYLLL GSDLVGKSPC DGKVVNFNLY DPRKQEQVKI ENKILSKEVY ESHKLGSSRG WLALLNKKDS
101: TVRLTNILNP SKKIISLPSL TRDKYESHVN VSVSSSNEED CVVAVKFYGS RVSLCRPGDS EWTRIDVPCP SFHSSTVIYS ERDRRFYLNN CNPDYTGPTD
201: FTPKSGLHTP VSGYKRFLFS NFLEEMPELE NERRLSRFRI QQQLVESASG QSFIVAWFVE SLTDKGEVAT WGDTRYNNNK DLCKKTHKIM VIRQDEEQGI
301: GPYTDDIGDL CIFLGENESF CLSAKDFPGL NPNSVYFAGH GSGYGIWDLA SCTIRYLSDS TPPPGRMFWL PPTISQ

Arabidopsis Description

Uncharacterized protein T6L1.14 [Source:UniProtKB/TrEMBL;Acc:Q9CAA6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.