Factsheet for Bra020431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59993	Canola	cytosol, plastid	74.52	98.53
Bra040901.1-P	Field mustard	mitochondrion	56.23	56.08
AT5G55440.1	Thale cress	mitochondrion	56.51	55.89
Bra015434.1-P	Field mustard	cytosol	37.4	39.47
Bra010792.1-P	Field mustard	cytosol	19.11	38.98
Bra030615.1-P	Field mustard	mitochondrion	38.78	38.67
Bra015433.1-P	Field mustard	mitochondrion	38.78	38.04
Bra030614.1-P	Field mustard	mitochondrion	36.57	37.39
Bra039286.1-P	Field mustard	mitochondrion	34.35	35.73
Bra010793.1-P	Field mustard	mitochondrion	36.01	35.52
Bra032294.1-P	Field mustard	cytosol	31.3	34.88
Bra010791.1-P	Field mustard	mitochondrion	34.35	34.83
Bra000405.1-P	Field mustard	plastid	37.12	34.81
Bra022669.1-P	Field mustard	cytosol	35.73	34.58
Bra010846.1-P	Field mustard	mitochondrion	35.18	34.14
Bra004352.1-P	Field mustard	mitochondrion	34.63	33.6
Bra022671.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	34.9	32.98
Bra000406.1-P	Field mustard	cytosol	31.58	31.49
Bra033734.1-P	Field mustard	cytosol	27.15	25.26
Bra017579.1-P	Field mustard	cytosol	18.28	23.08

Protein Annotations

EnsemblPlants:Bra020431.1	EnsemblPlants:Bra020431.1-P	EnsemblPlantsGene:Bra020431	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3
PFAM:PF03478	SEG:seg	UniParc:UPI0002545EE6	UniProt:M4DV87	MapMan:35.2	:

Description

AT5G55440 (E=2e-100) | unknown protein

Coordinates

chrA02:-:6727336..6728508

Molecular Weight (calculated)

40745.4 Da

IEP (calculated)

7.947

GRAVY (calculated)

-0.372

Length

361 amino acids

Sequence
(BLAST)

001: MSLFLSRISK LSAYKVKNAR FFSSLPESSP YLLLSSEKLG ETCEGNETVR QKLFDPRKEE TVSGSEKTLP KELEGDILVG ASKGWVLSMD KKDSSLHLTD
101: LCKPWVSSSP RVMSLPSLGF DPCVTVKQVS LSSSSPDECT VAANFSESQL SVCRTNCDSS WTHFKTPFPL LQASDLMYSK RDNAFYFASN KGLYMGSLHL
201: SSNKLKYQEL RFSSLPKFPE AEWEMLDTCF MSKHFVESPS GELFFVKWYR QFLHKENNNN GRREVEDIHS KTRWFMVFRQ DDNTKALSYT QDIGDLCIFL
301: GKSEAFCLSA SLYPGLKPNS IYYIGSGLGS YHLPSGTVRP YNPLGSPKTL HAPFWLDPIS S

Best Arabidopsis Sequence Match ( AT5G55440.1 )
(BLAST)

001: MALFFSRISK LSGRRNNARF FSSLPPSPCL VLTTKKLRGS PEEGLIVHHK LFEPATEKKV YGNEKKYPKE LHGAPLLGAS KGWVAFFKEK DISVHLTDLY
101: KPCVSSPRVI SLPSLKLDYK PATHATEVCL SSSDPVQDDY YVAAKFNDYH VSVCRPRWDS DWTHNETGYS LLPASELMYS KRDKAFHFTS FKGLYMGSLY
201: LSKKDEIKYK EIRLRNLPKI PEAGWEMLDK CSMTNHLVDS PSGELFFIKW YTQCIHKEDE DGDLECLHSK TKRFMVFRQD GMSKDFGYTE DIGDLCIFLG
301: KSEAFCVTAS LYPGLKPNSI YYLGPRFGSY DLASGTNSSF TFDRFGKPSL VVPYWIHSTS SLSSS

Arabidopsis Description

F-box protein, putative (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9FJ66]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.