CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90231	Canola	mitochondrion	98.63	98.63
AT1G30170.1	Thale cress	mitochondrion	77.6	77.6
CDX99887	Canola	extracellular, plasma membrane	65.57	67.61
CDX86571	Canola	cytosol	14.48	61.63
CDY10120	Canola	mitochondrion	46.17	50.0
CDX99886	Canola	cytosol	29.51	49.54
CDY57750	Canola	plastid	50.0	49.06
CDX86573	Canola	mitochondrion	48.63	49.04
CDY15545	Canola	mitochondrion	44.26	48.65
CDY50787	Canola	cytosol	42.08	47.53
CDX99796	Canola	mitochondrion	51.37	47.36
CDX99797	Canola	plastid	48.36	47.33
CDY43323	Canola	mitochondrion	47.81	47.04
CDX90173	Canola	mitochondrion	47.81	47.04
CDY57749	Canola	mitochondrion	45.08	46.88
CDY47275	Canola	cytosol	49.18	46.88
CDY51468	Canola	mitochondrion	45.9	46.67
CDX90232	Canola	mitochondrion	45.36	46.63
CDX98187	Canola	mitochondrion	44.54	44.66
CDX86572	Canola	mitochondrion	21.58	44.63
CDY47276	Canola	mitochondrion	44.26	44.02
CDY10119	Canola	mitochondrion	43.99	43.75
CDX95667	Canola	mitochondrion, plastid	44.26	42.52
CDX83388	Canola	plastid	43.44	41.51
CDY15546	Canola	plastid	42.62	39.9
CDX95668	Canola	mitochondrion	41.53	39.79
CDX83387	Canola	cytosol	38.52	38.95
CDY65427	Canola	cytosol	19.95	37.82
CDY59993	Canola	cytosol, plastid	27.32	36.63
CDX95813	Canola	mitochondrion	28.96	33.65
CDY65207	Canola	mitochondrion	29.51	33.54
CDX94769	Canola	cytosol	34.15	33.51
CDY02744	Canola	mitochondrion	21.31	33.48
CDY48999	Canola	cytosol	34.7	32.73
CDY28820	Canola	cytosol	33.33	32.71
CDY27327	Canola	cytosol	15.3	31.82
CDY23447	Canola	mitochondrion	16.94	31.63
CDY03244	Canola	cytosol	21.86	31.37
CDY53420	Canola	cytosol	28.42	30.95
CDY71779	Canola	mitochondrion	28.69	29.83
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.96	27.75
CDY41583	Canola	mitochondrion	17.21	27.27
CDX95970	Canola	mitochondrion	27.32	27.03
CDY33565	Canola	plastid	27.87	26.84
CDY35144	Canola	mitochondrion	22.95	26.58
CDX92018	Canola	mitochondrion	28.14	26.34
CDX92019	Canola	mitochondrion	28.42	26.07
CDY10122	Canola	mitochondrion	49.73	25.1

Protein Annotations

EnsemblPlants:CDY51469	EnsemblPlantsGene:GSBRNA2T00003527001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDY51469	ProteinID:CDY51469.1	SEG:seg	UniParc:UPI0004EDF896	UniProt:A0A078IPZ6	MapMan:35.2

Description

BnaC03g59100DBnaC03g59100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPZ6]

Coordinates

chrLK032998:+:42472..43791

Molecular Weight (calculated)

41341.2 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.324

Length

366 amino acids

Sequence
(BLAST)

001: MSLLLSKLSP IMHRRSMSVR SFSSSMTGPY MSLSLKVNPS PGGVNIGKVL VFDPAKEELL ELTDKAIPEE IIMTKATGAS KGWGFFSDPQ DSCILITDVM
101: NPWSCKSNPK IFTLPPLTPL PSCQTDVIWS VAMSSCPDDD QDWVVGIKSL GDQLSFCRPR RDLRWTKITT PPDYFPTSNL MYSKKDRKFY LTGPGGHHLL
201: SYDLHFKKSD KPEFHELQFR NFPESFKYDS EQSELFPSSC RTERLVESAS GDERFLVKWY AKGCLDSRKI SYETQRIMVF REEETTDGRF MCYTDDIGDM
301: CIFVSKGEAF CIPASSFPGL KSNSIYFIGF GVGVYDLTTR TSSSFQAPTG ALNYPWAPYW FPPSSS

Best Arabidopsis Sequence Match ( AT1G30170.1 )
(BLAST)

001: MSRLLSKLSP LIHKRSVRSF SSSTTGPYLQ LSLSAKPSSE GVVNIGEIVL YDPAKQELLN LTDKPIPEEI VTAKWIGASK GWAFFLDTQD RCVLITDSLN
101: PWACKSNPKL LTLPPLNPLF SCQTDVIWNV AMSSCPDDDE DWVVGIKSLG DQVSFCRPRR DLRWTKFQTP SDHFPTSNLT YSKRDRKFYL PGPGGHHLLS
201: YDLDFNKADQ PEFHELQFRN FPESLKYDSE LSELFPSSCR TERFVESPSG DERFLVKWYA KGCLASSSKI TYETQRFMVF REEETTEERF MCYTDDIGDL
301: CIFVSKSEAF CVPASSYPGL KPNSIYFVGF GLGIYDLTTR NVSIFRAPKG ALNQIVSPYW FPPASS

Arabidopsis Description

Uncharacterized protein T2H7.3 [Source:UniProtKB/TrEMBL;Acc:Q9C6Z8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.