CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23447	Canola	mitochondrion	54.04	88.78
Bra039286.1-P	Field mustard	mitochondrion	94.1	87.32
CDX95813	Canola	mitochondrion	85.09	86.98
CDY27327	Canola	cytosol	46.89	85.8
AT5G03390.1	Thale cress	mitochondrion	47.83	41.29
CDY59993	Canola	cytosol, plastid	30.43	35.9
CDY71779	Canola	mitochondrion	39.13	35.8
CDX86571	Canola	cytosol	9.32	34.88
CDX95970	Canola	mitochondrion	39.44	34.32
CDY33565	Canola	plastid	39.44	33.42
CDY65427	Canola	cytosol	18.63	31.09
CDY10120	Canola	mitochondrion	32.3	30.77
CDY41583	Canola	mitochondrion	21.74	30.3
CDX90231	Canola	mitochondrion	33.85	29.78
CDY51469	Canola	mitochondrion	33.54	29.51
CDY57750	Canola	plastid	33.85	29.22
CDY47275	Canola	cytosol	34.78	29.17
CDX99886	Canola	cytosol	19.57	28.9
CDX95667	Canola	mitochondrion, plastid	33.85	28.61
CDX83387	Canola	cytosol	31.99	28.45
CDX99887	Canola	extracellular, plasma membrane	31.06	28.17
CDY57749	Canola	mitochondrion	30.75	28.12
CDY10119	Canola	mitochondrion	31.99	27.99
CDX83388	Canola	plastid	32.92	27.68
CDY50787	Canola	cytosol	27.64	27.47
CDY47276	Canola	mitochondrion	31.37	27.45
CDX86573	Canola	mitochondrion	30.75	27.27
CDX98187	Canola	mitochondrion	30.75	27.12
CDX86572	Canola	mitochondrion	14.91	27.12
CDY28820	Canola	cytosol	31.37	27.08
CDX90173	Canola	mitochondrion	31.06	26.88
CDY43323	Canola	mitochondrion	31.06	26.88
CDY15545	Canola	mitochondrion	27.64	26.73
CDY02744	Canola	mitochondrion	19.25	26.61
CDY51468	Canola	mitochondrion	29.19	26.11
CDX92018	Canola	mitochondrion	31.68	26.09
CDX92019	Canola	mitochondrion	32.3	26.07
CDX99797	Canola	plastid	30.12	25.94
CDX90232	Canola	mitochondrion	28.57	25.84
CDY15546	Canola	plastid	31.37	25.83
CDX95668	Canola	mitochondrion	30.43	25.65
CDX99796	Canola	mitochondrion	31.37	25.44
CDY03244	Canola	cytosol	18.32	23.14
CDX94769	Canola	cytosol	25.78	22.25
CDY48999	Canola	cytosol	26.71	22.16
CDY53420	Canola	cytosol	22.98	22.02
CDY28818	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	26.09	21.99
CDY35144	Canola	mitochondrion	18.63	18.99
CDY10122	Canola	mitochondrion	33.85	15.03

Protein Annotations

EnsemblPlants:CDY65207	EnsemblPlantsGene:GSBRNA2T00045388001	InterPro:DUF295	PANTHER:PTHR31681	PANTHER:PTHR31681:SF3	PFAM:PF03478
ProteinID:CDY65207	ProteinID:CDY65207.1	SEG:seg	UniParc:UPI0004EE9108	UniProt:A0A078JIJ4	MapMan:35.2

Description

BnaAnng20300DBnaAnng20300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIJ4]

Coordinates

chrLK034693:+:9120..10480

Molecular Weight (calculated)

35899.9 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.143

Length

322 amino acids

Sequence
(BLAST)

001: MFLLVGGTRK LRSFSTAAAA AAAQPYLLVR ERETLPTEVA KSLRIGSSKG WVAVTDLQNS KLRLTNLFNP CASSPTTITL PPLDGCYRGS VARVSKVSLS
101: ASPNQRDCVV AAKLFAPLVS LCRPGDSEWT HIETPNTFFR SVLMHSMRDQ KFYLYSSDRA PTDLIKTCSD FPPVSPYRRF FFSDIPKTTQ DLYQSSLFRT
201: QYLVESPSGD SFIVIWCKAG GKMEKETSRL MCETKGFMVF KQDHGKKLCS YTQDIGDLCI FLGKNESFCV SATKYPGLNP NSVYFEGSET GFGFYDLSSN
301: TVHDLTHLAP FSAFYLWLAP LE

Best Arabidopsis Sequence Match ( AT5G03390.1 )
(BLAST)

001: MSQLLGRTAK ISSVVKKQRL CFSELRSFST AATPYLLLKD TNYRAASGGS VVDINLYDPR KKEIVKIRDQ YLSEELQCTM KMGSSRGWIV AKTIYEPTLY
101: LTNIFNPCAS VSSHKVFNLP PLEDDAKARI SSISLSASPN QQDCVLAVKS SSSPFLSLWR PGDSAWTRIK VPFPASNVMM YSGRDRKFYL LPRESKEECE
201: GPIDLINTSS DDFPQVTLYQ RFPNSDIPVS RQEQLLSSIK TRYLVESPSG DSFIVYWCNE RSFYWKKGEV KPWTGKNPPP SRISCRLKTR TFVVFRQDSE
301: QGIGSYTEDI GDLCIFLGHR EAFCVSATEY PGLRPNSVYY ATSGTGFGYY DLSSNTLHDV IHEGLFSWIA PLQ

Arabidopsis Description

At5g03390 [Source:UniProtKB/TrEMBL;Acc:Q9LZF0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.