Factsheet for AT5G52010.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32605	Canola	nucleus	82.32	84.46
Bra029148.1-P	Field mustard	nucleus, plastid	81.31	82.99
CDY38889	Canola	nucleus	81.31	82.99
GSMUA_Achr8P18570_001	Banana	nucleus	46.21	68.03
KRH15394	Soybean	nucleus	50.25	59.76
PGSC0003DMT400003844	Potato	nucleus	52.27	55.5
KRH05651	Soybean	nucleus	51.52	53.68
VIT_18s0001g10130.t01	Wine grape	nucleus, plastid	57.32	51.13
Zm00001d036297_P001	Maize	plastid	44.7	47.84
Os06t0166200-01	Rice	plastid	47.47	45.85
EER87918	Sorghum	plastid	45.71	45.71
TraesCS7B01G028600.1	Wheat	nucleus, plastid	45.96	45.16
TraesCS7A01G128700.1	Wheat	nucleus, plastid	46.21	44.74
TraesCS7D01G127500.1	Wheat	nucleus, plastid	45.96	44.61
AT4G12240.1	Thale cress	mitochondrion	33.08	35.99

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:835276	UniProt:A0A178UA35	ProteinID:AED96158.1	ArrayExpress:AT5G52010
EnsemblPlantsGene:AT5G52010	RefSeq:AT5G52010	TAIR:AT5G52010	RefSeq:AT5G52010-TAIR-G	EnsemblPlants:AT5G52010.1	TAIR:AT5G52010.1
EMBL:AY039592	EMBL:AY129489	ProteinID:BAB11049.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR013087	RefSeq:NP_200014.1	ProteinID:OAO90828.1	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR35744
PANTHER:PTHR35744:SF3	UniProt:Q9FJ91	UniParc:UPI000009FE74	InterPro:Znf_C2H2_type	SEG:seg	:

Description

AT5g52010/MSG15_9 [Source:UniProtKB/TrEMBL;Acc:Q9FJ91]

Coordinates

chr5:-:21121405..21123133

Molecular Weight (calculated)

45756.0 Da

IEP (calculated)

6.860

GRAVY (calculated)

-0.746

Length

396 amino acids

Sequence
(BLAST)

001: MSLFCNSIET LYPKPFLSHK SHFFTFSNSK FQNPKFTSFP LRHQWRIESC LKSASSSEID MVRNKEGIFA PKEKKVVVLW DLDNKPPRGP PYEAATALRK
101: VAEKLGRVVE ISAYANRHAF IHLPHWVVEE RRERRNLDFM ERKGEVTPID PYICGVCGRK CKTNLDLKKH FKQLHERERQ KKVNRMRSLK GKKRQKFKER
201: YVSGNEKYNE AARSLLTPKV GYGLEAELRR AGVYVKTVED KPQAADWAVK RQIQHSMTRG IDWLVLVSDD KDFSDMLRKA READLGTLVV SDMDRALGRH
301: ADLWVPWSGV EKGEIGEKDL IPGKRPRFEE DEVGFGGNDE LFSLSYDEDE KAEMTVESDG FGRFNVSAFS EDEWVEDEGD FVLSDSSDDD SDDELF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.