Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G65060.1 | Thale cress | nucleus | 87.76 | 87.76 |
| CDY14535 | Canola | cytosol, nucleus, plastid | 33.67 | 79.52 |
| Bra024350.1-P | Field mustard | nucleus | 70.41 | 70.41 |
| AT1G77080.8 | Thale cress | nucleus | 76.02 | 66.82 |
| AT5G10140.1 | Thale cress | nucleus | 61.22 | 61.22 |
| AT5G65080.2 | Thale cress | nucleus | 58.67 | 56.37 |
| AT5G65070.3 | Thale cress | nucleus | 62.76 | 53.02 |
| CDY08825 | Canola | nucleus | 67.86 | 38.78 |
| KRH58791 | Soybean | nucleus | 37.76 | 37.0 |
| Solyc12g087830.1.1 | Tomato | nucleus | 36.73 | 36.36 |
| KRH42691 | Soybean | nucleus | 33.67 | 35.48 |
| Solyc05g015720.1.1 | Tomato | nucleus | 19.9 | 29.77 |
| PGSC0003DMT400045804 | Potato | nucleus | 32.65 | 28.44 |
| Solyc12g087810.1.1 | Tomato | nucleus | 18.37 | 25.71 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:836629 | UniProt:A0A178UKR6 | ProteinID:ACL93430.1 | ProteinID:ACL93446.1 |
| ProteinID:AED97991.1 | ProteinID:AED97992.1 | EMBL:AF312667 | Symbol:AGL31 | ArrayExpress:AT5G65050 | EnsemblPlantsGene:AT5G65050 |
| RefSeq:AT5G65050 | TAIR:AT5G65050 | RefSeq:AT5G65050-TAIR-G | EnsemblPlants:AT5G65050.3 | TAIR:AT5G65050.3 | EMBL:AY141211 |
| EMBL:AY231441 | Unigene:At.49225 | ProteinID:BAB10332.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0000977 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 | GO:GO:0010048 |
| GO:GO:0010221 | GO:GO:0030154 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR002487 |
| InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_001078798.1 | RefSeq:NP_001119498.1 | ProteinID:OAO93291.1 | PFAM:PF00319 |
| PFAM:PF01486 | PO:PO:0000293 | PO:PO:0006339 | PO:PO:0006340 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 |
| PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF340 | UniProt:Q9FPN7 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000005FA27 | : | : |
Description
AGL31Agamous-like MADS-box protein AGL31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPN7]
Coordinates
chr5:+:25982254..25986435
Molecular Weight (calculated)
22062.6 Da
IEP (calculated)
9.005
GRAVY (calculated)
-0.512
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKKVEIKR IENKSSRQVT FSKRRNGLIE KARQLSILCE SSIAVLVVSG SGKLYKSASG DNMSKIIDRY EIHHADELEA LDLAEKTRNY LPLKELLEIV
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTE NLLREENQTL ASQVGKKTFL VIEGDRGMSW ENGSGNKVRE TLPLLK
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTE NLLREENQTL ASQVGKKTFL VIEGDRGMSW ENGSGNKVRE TLPLLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.