Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024350.1-P | Field mustard | nucleus | 92.77 | 39.29 |
| CDY33995 | Canola | nucleus | 80.72 | 34.9 |
| CDY33990 | Canola | nucleus | 79.52 | 34.38 |
| CDY31290 | Canola | nucleus | 79.52 | 34.38 |
| AT5G65050.3 | Thale cress | nucleus | 79.52 | 33.67 |
| AT5G65060.1 | Thale cress | nucleus | 77.11 | 32.65 |
| CDY31289 | Canola | nucleus | 77.11 | 32.16 |
| CDX85776 | Canola | nucleus | 75.9 | 32.14 |
| CDY08824 | Canola | nucleus | 75.9 | 31.34 |
| CDY31286 | Canola | nucleus | 74.7 | 31.16 |
| CDY40081 | Canola | nucleus | 73.49 | 31.12 |
| CDX69859 | Canola | nucleus | 73.49 | 30.96 |
| CDY21642 | Canola | nucleus | 72.29 | 30.46 |
| CDX84867 | Canola | nucleus | 71.08 | 30.1 |
| AT1G77080.8 | Thale cress | nucleus | 79.52 | 29.6 |
| CDX78370 | Canola | nucleus | 69.88 | 29.44 |
| CDX81163 | Canola | nucleus | 68.67 | 28.93 |
| CDY21638 | Canola | nucleus | 72.29 | 26.2 |
| CDY24038 | Canola | nucleus | 62.65 | 24.64 |
| CDY08825 | Canola | nucleus | 91.57 | 22.16 |
| KRH42691 | Soybean | nucleus | 49.4 | 22.04 |
| KRH58791 | Soybean | nucleus | 48.19 | 20.0 |
| Solyc12g087830.1.1 | Tomato | nucleus | 43.37 | 18.18 |
| PGSC0003DMT400045804 | Potato | nucleus | 44.58 | 16.44 |
| Solyc05g015720.1.1 | Tomato | nucleus | 4.82 | 3.05 |
| Solyc12g087810.1.1 | Tomato | nucleus | 4.82 | 2.86 |
| CDY33987 | Canola | nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078FJE8 | UniProt:A0A078FJE8 | EnsemblPlants:CDY14535 | ProteinID:CDY14535 |
| ProteinID:CDY14535.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00079250001 | InterPro:IPR002100 | InterPro:IPR036879 | PFAM:PF00319 | PRINTS:PR00404 | ScanProsite:PS00350 |
| PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF172 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI0004EDDCEA | : | : | : | : |
Description
BnaC03g49240DBnaC03g49240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJE8]
Coordinates
chrLK032044:+:266566..269257
Molecular Weight (calculated)
9372.5 Da
IEP (calculated)
10.834
GRAVY (calculated)
-0.367
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MGRRKVQIKR IENKSSRQVT FCKRRNGLIE KARQLSVLCE SSVAVLVVSA IGKLYNSSSG DNMSKIIDRY KIQQADDLQT LVT
001: MGRKKVEIKR IENKSSRQVT FSKRRNGLIE KARQLSILCE SSIAVLVVSG SGKLYKSASG DNMSKIIDRY EIHHADELEA LDLAEKTRNY LPLKELLEIV
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTE NLLREENQTL ASQVTKTSLE ANSSVDTQ
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTE NLLREENQTL ASQVTKTSLE ANSSVDTQ
Arabidopsis Description
AGL31Agamous-like MADS-box protein AGL31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.