Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G65050.3 | Thale cress | nucleus | 87.76 | 87.76 |
| CDY14535 | Canola | cytosol, nucleus, plastid | 32.65 | 77.11 |
| Bra024350.1-P | Field mustard | nucleus | 71.43 | 71.43 |
| AT1G77080.8 | Thale cress | nucleus | 78.57 | 69.06 |
| AT5G10140.1 | Thale cress | nucleus | 60.71 | 60.71 |
| AT5G65080.2 | Thale cress | nucleus | 60.71 | 58.33 |
| AT5G65070.3 | Thale cress | nucleus | 63.27 | 53.45 |
| CDY08825 | Canola | nucleus | 68.88 | 39.36 |
| Solyc12g087830.1.1 | Tomato | nucleus | 38.78 | 38.38 |
| KRH58791 | Soybean | nucleus | 37.24 | 36.5 |
| KRH42691 | Soybean | nucleus | 32.65 | 34.41 |
| Solyc05g015720.1.1 | Tomato | nucleus | 19.39 | 29.01 |
| PGSC0003DMT400045804 | Potato | nucleus | 33.16 | 28.89 |
| Solyc12g087810.1.1 | Tomato | nucleus | 19.39 | 27.14 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:836630 | ProteinID:ACL93409.1 | ProteinID:ACL93416.1 | ProteinID:ACL93423.1 |
| ProteinID:ACL93443.1 | ProteinID:AED97993.1 | ArrayExpress:AT5G65060 | EnsemblPlantsGene:AT5G65060 | RefSeq:AT5G65060 | TAIR:AT5G65060 |
| RefSeq:AT5G65060-TAIR-G | EnsemblPlants:AT5G65060.1 | TAIR:AT5G65060.1 | EMBL:AY231445 | ProteinID:BAA97510.1 | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009910 | GO:GO:0009987 |
| GO:GO:0010048 | GO:GO:0046983 | GO:GO:2000028 | InterPro:IPR002100 | InterPro:IPR002487 | InterPro:IPR036879 |
| Symbol:MAF3 | RefSeq:NP_201311.1 | PFAM:PF00319 | PFAM:PF01486 | PO:PO:0000293 | PRINTS:PR00404 |
| PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF172 | UniProt:Q9LSR7 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0000052A3F | SEG:seg |
Description
MAF3Agamous-like MADS-box protein AGL70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSR7]
Coordinates
chr5:+:25987309..25991412
Molecular Weight (calculated)
22130.8 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.479
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKVEIKR IENKSSRQVT FSKRRKGLIE KARQLSILCE SSIAVVAVSG SGKLYDSASG DNMSKIIDRY EIHHADELKA LDLAEKIRNY LPHKELLEIV
101: QSKLEESNVD NVSVDSLISM EEQLETALSV IRAKKTELMM EDMKSLQERE KLLIEENQIL ASQVGKKTFL VIEGDRGMSR ENGSGNKVPE TLSLLK
101: QSKLEESNVD NVSVDSLISM EEQLETALSV IRAKKTELMM EDMKSLQERE KLLIEENQIL ASQVGKKTFL VIEGDRGMSR ENGSGNKVPE TLSLLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.