Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42691 | Soybean | nucleus | 66.0 | 70.97 |
| CDY14535 | Canola | cytosol, nucleus, plastid | 20.0 | 48.19 |
| Bra022771.1-P | Field mustard | nucleus | 28.5 | 39.86 |
| CDY31286 | Canola | nucleus | 39.5 | 39.7 |
| Bra031884.1-P | Field mustard | nucleus | 39.5 | 39.7 |
| CDY40081 | Canola | nucleus | 38.0 | 38.78 |
| Bra006051.1-P | Field mustard | nucleus | 38.0 | 38.58 |
| CDX81163 | Canola | nucleus | 38.0 | 38.58 |
| CDX78370 | Canola | nucleus | 38.0 | 38.58 |
| AT5G10140.1 | Thale cress | nucleus | 37.5 | 38.27 |
| CDX85776 | Canola | nucleus | 37.5 | 38.27 |
| Bra028599.1-P | Field mustard | nucleus | 37.5 | 38.27 |
| CDX69859 | Canola | nucleus | 37.5 | 38.07 |
| AT5G65050.3 | Thale cress | nucleus | 37.0 | 37.76 |
| CDY21642 | Canola | nucleus | 37.0 | 37.56 |
| Bra009055.1-P | Field mustard | nucleus | 38.5 | 37.38 |
| AT5G65060.1 | Thale cress | nucleus | 36.5 | 37.24 |
| Bra024350.1-P | Field mustard | nucleus | 36.0 | 36.73 |
| CDX84867 | Canola | nucleus | 36.0 | 36.73 |
| Bra024351.1-P | Field mustard | nucleus | 35.5 | 35.5 |
| CDY31289 | Canola | nucleus | 35.0 | 35.18 |
| CDY31290 | Canola | nucleus | 33.5 | 34.9 |
| CDY33995 | Canola | nucleus | 33.5 | 34.9 |
| CDY08824 | Canola | nucleus | 35.0 | 34.83 |
| AT5G65080.2 | Thale cress | nucleus | 35.5 | 34.8 |
| CDY33990 | Canola | nucleus | 33.0 | 34.38 |
| Bra031888.1-P | Field mustard | nucleus | 29.5 | 33.15 |
| AT1G77080.8 | Thale cress | nucleus | 36.5 | 32.74 |
| CDY21638 | Canola | nucleus | 37.0 | 32.31 |
| CDY24038 | Canola | nucleus | 33.0 | 31.28 |
| AT5G65070.3 | Thale cress | nucleus | 35.5 | 30.6 |
| Solyc12g087830.1.1 | Tomato | nucleus | 30.0 | 30.3 |
| Bra031886.1-P | Field mustard | nucleus | 34.5 | 27.6 |
| PGSC0003DMT400045804 | Potato | nucleus | 28.5 | 25.33 |
| CDY33987 | Canola | nucleus, plastid | 13.5 | 24.55 |
| Solyc05g015720.1.1 | Tomato | nucleus | 16.0 | 24.43 |
| Solyc12g087810.1.1 | Tomato | nucleus | 16.5 | 23.57 |
| CDY08825 | Canola | nucleus | 36.0 | 20.99 |
Protein Annotations
| EntrezGene:100804540 | MapMan:15.5.14 | Gene3D:3.40.1810.10 | EMBL:ACUP02003292 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G148700 |
| GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045944 | GO:GO:0046983 | UniProt:I1K3N4 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | EnsemblPlants:KRH58791 | ProteinID:KRH58791 | ProteinID:KRH58791.1 | InterPro:MADS_MEF2-like |
| PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF172 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| TMHMM:TMhelix | UniParc:UPI00023C50F5 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:34275584..34292093
Molecular Weight (calculated)
23142.3 Da
IEP (calculated)
9.532
GRAVY (calculated)
-0.257
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKKLEIKR IENKSNRQIT FSKRRKGLMK KARELSILCD AKLALLIFSS TGKLYELCNG DSLAEVVQRY WDNLGASGTD TKGLRFEIAD IWSDEAFSQL
101: VQSHFGVSEL EHLSVTDLME LEKLVHSALS RIRSAKMRLM MESVENLKKK EHILRNENEL LEKQVKMYTK SCTESYMSIL SFYVVNILFF YSILELSINK
101: VQSHFGVSEL EHLSVTDLME LEKLVHSALS RIRSAKMRLM MESVENLKKK EHILRNENEL LEKQVKMYTK SCTESYMSIL SFYVVNILFF YSILELSINK
001: MGRKKVEIKR IENKSSRQVT FSKRRNGLIE KARQLSILCE SSIAVLVVSG SGKLYKSASG DNMSKIIDRY EIHHADELEA LDLAEKTRNY LPLKELLEIV
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTE NLLREENQTL ASQVTKTSLE ANSSVDTQ
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTE NLLREENQTL ASQVTKTSLE ANSSVDTQ
Arabidopsis Description
AGL31Agamous-like MADS-box protein AGL31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.