Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31286 | Canola | nucleus | 99.5 | 99.5 |
| Bra024351.1-P | Field mustard | nucleus | 71.86 | 71.5 |
| Bra024350.1-P | Field mustard | nucleus | 65.33 | 66.33 |
| Bra031888.1-P | Field mustard | nucleus | 57.79 | 64.61 |
| AT5G65080.2 | Thale cress | nucleus | 65.83 | 64.22 |
| Bra022771.1-P | Field mustard | nucleus | 42.21 | 58.74 |
| Bra028599.1-P | Field mustard | nucleus | 55.78 | 56.63 |
| Bra006051.1-P | Field mustard | nucleus | 54.77 | 55.33 |
| Bra009055.1-P | Field mustard | nucleus | 56.78 | 54.85 |
| Bra031886.1-P | Field mustard | nucleus | 60.3 | 48.0 |
| Solyc12g087830.1.1 | Tomato | nucleus | 40.2 | 40.4 |
| KRH58791 | Soybean | nucleus | 39.7 | 39.5 |
| KRH42691 | Soybean | nucleus | 35.18 | 37.63 |
| Solyc05g015720.1.1 | Tomato | nucleus | 22.11 | 33.59 |
| PGSC0003DMT400045804 | Potato | nucleus | 32.16 | 28.44 |
| Solyc12g087810.1.1 | Tomato | nucleus | 18.59 | 26.43 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:AAO22520 | ProteinID:AAO22520.1 | EMBL:AY176676 | EnsemblPlantsGene:Bra031884 |
| EnsemblPlants:Bra031884.1 | EnsemblPlants:Bra031884.1-P | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | UniProt:M4ESV4 | InterPro:MADS_MEF2-like | PFAM:PF00319 | PFAM:PF01486 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF172 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00025468F7 |
| SEG:seg | : | : | : | : | : |
Description
AT5G65070 (E=3e-069) MAF4, FCL4, AGL69 | MAF4 (MADS AFFECTING FLOWERING 4); transcription factor
Coordinates
chrA02:+:27283394..27288194
Molecular Weight (calculated)
22797.8 Da
IEP (calculated)
10.155
GRAVY (calculated)
-0.560
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKVEIKR IENKSSRQVT FCKRRNGLMK KARQLSILCE SSVALLIVSS TGKLYSSSSG DSMAKILTRY KTQHADELKT VDLAEKTRNY LSHEELLEIV
101: QCKLEEAKND NMSIESLISL EEQFKSALSL TRARKAELMM EFLKTLQEKE KLLREENKVL ASQLTKMKKS RFLEAEDERA MSLAKSFGNN TPETLSLLK
101: QCKLEEAKND NMSIESLISL EEQFKSALSL TRARKAELMM EFLKTLQEKE KLLREENKVL ASQLTKMKKS RFLEAEDERA MSLAKSFGNN TPETLSLLK
001: MGRRKVEIKR IENKSSRQVT FCKRRNGLME KARQLSILCE SSVALIIISA TGRLYSFSSG DSMAKILSRY ELEQADDLKT LDLEEKTLNY LSHKELLETI
101: QCKIEEAKSD NVSIDCLKSL EEQLKTALSV TRARKTELMM ELVKTHQEKE KLLREENQSL TNQLIKMGKM KKSVEAEDAR AMSPESSSDN KPPETLLLLK
101: QCKIEEAKSD NVSIDCLKSL EEQLKTALSV TRARKTELMM ELVKTHQEKE KLLREENQSL TNQLIKMGKM KKSVEAEDAR AMSPESSSDN KPPETLLLLK
Arabidopsis Description
MAF4K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4KGH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.