Factsheet for Bra024351.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08824	Canola	nucleus	99.0	98.51
Bra031884.1-P	Field mustard	nucleus	71.5	71.86
Bra024350.1-P	Field mustard	nucleus	63.5	64.8
Bra031888.1-P	Field mustard	nucleus	57.5	64.61
Bra022771.1-P	Field mustard	nucleus	42.0	58.74
Bra028599.1-P	Field mustard	nucleus	56.0	57.14
Bra006051.1-P	Field mustard	nucleus	56.0	56.85
Bra009055.1-P	Field mustard	nucleus	57.5	55.83
Bra031886.1-P	Field mustard	nucleus	58.0	46.4
Solyc12g087830.1.1	Tomato	nucleus	38.5	38.89
KRH42691	Soybean	nucleus	34.0	36.56
KRH58791	Soybean	nucleus	35.5	35.5
Solyc05g015720.1.1	Tomato	nucleus	19.5	29.77
Solyc12g087810.1.1	Tomato	nucleus	20.0	28.57
PGSC0003DMT400045804	Potato	nucleus	31.0	27.56

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra024351	EnsemblPlants:Bra024351.1	EnsemblPlants:Bra024351.1-P	ncoils:Coil
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0045944	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR002487	InterPro:IPR036879	UniProt:M4E6E7
InterPro:MADS_MEF2-like	PFAM:PF00319	PFAM:PF01486	PRINTS:PR00404	ScanProsite:PS00350	PFscan:PS50066
PFscan:PS51297	PANTHER:PTHR11945	PANTHER:PTHR11945:SF172	SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_Kbox
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000253F494	SEG:seg	:	:

Description

AT5G65070 (E=4e-065) MAF4, FCL4, AGL69 | MAF4 (MADS AFFECTING FLOWERING 4); transcription factor

Coordinates

chrA06:+:15125141..15128714

Molecular Weight (calculated)

22753.6 Da

IEP (calculated)

9.616

GRAVY (calculated)

-0.472

Length

200 amino acids

Sequence
(BLAST)

001: MGRRKVEIKR IENKSSRQVT FCKRRNGLIE KARQLSVLCG SSVAVLIVSS TGKVYSSSSG DSMAKILKHY EVQHADKLKT LDLTEKTQNY VSLNELLETV
101: QRKIEAANVD NISVQSLIFL EEQFKTALSL TRARKTELMM QLVKSLQEKE KLLRDENTVL ASQLAEMGKE KEFLETEDER AMLLEYSSGN NPRETLPLLK

Best Arabidopsis Sequence Match ( AT5G65070.1 )
(BLAST)

001: MGRRKVEIKR IENKSSRQVT FCKRRNGLME KARQLSILCE SSVALIIISA TGRLYSFSSG DSMAKILSRY ELEQADDLKT LDLEEKTLNY LSHKELLETI
101: QCKIEEAKSD NVSIDCLKSL EEQLKTALSV TRARKTELMM ELVKTHQEKE KLLREENQSL TNQLIKMGKM KKSVEAEDAR AMSPESSSDN KPPETLLLLK

Arabidopsis Description

MAF4K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4KGH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.