Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31290 | Canola | nucleus | 98.88 | 91.67 |
| Bra024350.1-P | Field mustard | nucleus | 70.79 | 64.29 |
| Bra031884.1-P | Field mustard | nucleus | 64.61 | 57.79 |
| Bra024351.1-P | Field mustard | nucleus | 64.61 | 57.5 |
| Bra028599.1-P | Field mustard | nucleus | 62.36 | 56.63 |
| Bra006051.1-P | Field mustard | nucleus | 60.11 | 54.31 |
| Bra009055.1-P | Field mustard | nucleus | 61.24 | 52.91 |
| Bra022771.1-P | Field mustard | nucleus | 40.45 | 50.35 |
| Bra031886.1-P | Field mustard | nucleus | 52.81 | 37.6 |
| Solyc12g087830.1.1 | Tomato | nucleus | 38.2 | 34.34 |
| KRH42691 | Soybean | nucleus | 33.71 | 32.26 |
| Solyc05g015720.1.1 | Tomato | nucleus | 22.47 | 30.53 |
| KRH58791 | Soybean | nucleus | 33.15 | 29.5 |
| PGSC0003DMT400045804 | Potato | nucleus | 33.71 | 26.67 |
| Solyc12g087810.1.1 | Tomato | nucleus | 18.54 | 23.57 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra031888 | EnsemblPlants:Bra031888.1 | EnsemblPlants:Bra031888.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | UniProt:M4ESV8 | PFAM:PF00319 | PFAM:PF01486 | PRINTS:PR00404 |
| ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF172 | SMART:SM00432 |
| SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00025468F4 | SEG:seg |
Description
AT1G77080 (E=4e-048) | MAF1 (MADS AFFECTING FLOWERING 1); transcription factor
Coordinates
chrA02:+:27262218..27266033
Molecular Weight (calculated)
19844.7 Da
IEP (calculated)
9.055
GRAVY (calculated)
-0.520
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKVEIKL IENKSSRQVT FSKRRTGLIE KARQLSVLCE SSVAVLVVSA SGKLYNSSSG DNMTNIVDRY EIQHAGELRS LDLAEKTRNY LPHKELLESV
101: KSNLEEPNVD SVSVDSLISL EDQLETALSA TRARKTELTM EFVKMLQEKI GTTNGRRENN SPVNSSGINP PETLPLLK
101: KSNLEEPNVD SVSVDSLISL EDQLETALSA TRARKTELTM EFVKMLQEKI GTTNGRRENN SPVNSSGINP PETLPLLK
001: MGRKKVEIKR IENKSSRQVT FSKRRNGLIE KARQLSILCE SSIAVLVVSG SGKLYKSASG DNMSKIIDRY EIHHADELEA LDLAEKTRNY LPLKELLEIV
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTV GKKTFLVIEG DRGMSWENGS GNKVRETLPL LK
101: QSKLEESNVD NASVDTLISL EEQLETALSV TRARKTELMM GEVKSLQKTV GKKTFLVIEG DRGMSWENGS GNKVRETLPL LK
Arabidopsis Description
AGL31Agamous-like MADS-box protein AGL31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FPN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.