Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31289 | Canola | nucleus | 80.91 | 44.72 |
| CDY31286 | Canola | nucleus | 61.82 | 34.17 |
| CDY08824 | Canola | nucleus | 59.09 | 32.34 |
| CDY33990 | Canola | nucleus | 53.64 | 30.73 |
| CDY33995 | Canola | nucleus | 52.73 | 30.21 |
| CDY31290 | Canola | nucleus | 50.91 | 29.17 |
| AT5G65070.3 | Thale cress | nucleus | 59.09 | 28.02 |
| Bra031886.1-P | Field mustard | nucleus | 60.0 | 26.4 |
| Solyc05g015720.1.1 | Tomato | nucleus | 30.91 | 25.95 |
| CDY21642 | Canola | nucleus | 42.73 | 23.86 |
| CDX69859 | Canola | nucleus | 42.73 | 23.86 |
| CDX84867 | Canola | nucleus | 40.91 | 22.96 |
| Solyc12g087810.1.1 | Tomato | nucleus | 29.09 | 22.86 |
| CDX85776 | Canola | nucleus | 39.09 | 21.94 |
| CDX81163 | Canola | nucleus | 39.09 | 21.83 |
| CDY40081 | Canola | nucleus | 38.18 | 21.43 |
| CDX78370 | Canola | nucleus | 38.18 | 21.32 |
| CDY21638 | Canola | nucleus | 41.82 | 20.09 |
| CDY24038 | Canola | nucleus | 33.64 | 17.54 |
| CDY08825 | Canola | nucleus | 52.73 | 16.91 |
| Solyc12g087830.1.1 | Tomato | nucleus | 30.0 | 16.67 |
| KRH58791 | Soybean | nucleus | 24.55 | 13.5 |
| KRH42691 | Soybean | nucleus | 19.09 | 11.29 |
| PGSC0003DMT400045804 | Potato | nucleus | 15.45 | 7.56 |
| CDY14535 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | GO:A0A078H8V0 | UniProt:A0A078H8V0 | EnsemblPlants:CDY33987 | ProteinID:CDY33987 | ProteinID:CDY33987.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00055838001 | InterPro:IPR002487 | PFAM:PF01486 | PFscan:PS51297 | InterPro:TF_Kbox |
| UniParc:UPI0004EDF071 | SEG:seg | : | : | : | : |
Description
BnaC02g43500DBnaC02g43500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8V0]
Coordinates
chrLK032325:-:364541..366705
Molecular Weight (calculated)
12621.3 Da
IEP (calculated)
5.320
GRAVY (calculated)
-0.613
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFLFLPWCS PQKKCEEAKV DDASVESLNS LEEQFKAALS ITRARKTQLM MEFLKNLEEK EKLLREENQI LASQLTKMEK KRLPETEGVR AMSSENSSGN
101: SPPETLPLLK
101: SPPETLPLLK
001: MHFCFSLDLS SMAKILSRYE LEQADDLKTL DLEEKTLNYL SHKELLETIQ CKIEEAKSDN VSIDCLKSLE EQLKTALSVT RARKTELMME LVKTHQEKEK
101: LLREENQSLT NQLIKMGKMK KSVEAEDARA MSPESSSDNK PPETLLLLK
101: LLREENQSLT NQLIKMGKMK KSVEAEDARA MSPESSSDNK PPETLLLLK
Arabidopsis Description
MAF4K-box region and MADS-box transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4KGH9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.