Factsheet for Bra001116.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74176	Canola	plastid	99.39	99.39
AT3G04650.1	Thale cress	plastid	91.6	91.98
KRH68746	Soybean	cytosol, peroxisome, plastid	17.01	70.94
VIT_14s0081g00490.t01	Wine grape	plastid	63.93	66.81
KRG96985	Soybean	mitochondrion	46.93	65.99
PGSC0003DMT400070768	Potato	plastid	59.63	65.1
Solyc01g097160.2.1	Tomato	plastid	60.66	59.2
EES16280	Sorghum	plastid	56.76	58.56
GSMUA_Achr8P03160_001	Banana	plastid	58.4	58.16
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	55.33	56.72
Os12t0597400-01	Rice	plastid	57.58	56.54
TraesCS5A01G059800.2	Wheat	plastid	55.33	56.37
TraesCS5D01G071300.1	Wheat	plastid	55.33	56.37
Zm00001d030962_P001	Maize	plastid	57.38	55.45
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	55.74	54.29
VIT_12s0055g01120.t01	Wine grape	cytosol	9.63	35.07
Bra037093.1-P	Field mustard	mitochondrion, plastid	21.31	26.94

Protein Annotations

EnsemblPlants:Bra001116.1	EnsemblPlants:Bra001116.1-P	EnsemblPlantsGene:Bra001116	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	SUPFAM:SSF51905	UniParc:UPI00025409B8
UniProt:M4CA87	MapMan:35.2	:	:	:	:

Description

AT3G04650 (E=3e-261) | oxidoreductase

Coordinates

chrA03:+:14834824..14837249

Molecular Weight (calculated)

52597.9 Da

IEP (calculated)

9.006

GRAVY (calculated)

-0.192

Length

488 amino acids

Sequence
(BLAST)

001: MATSLIPLSS SFLQPLKFKT LAKPRTPLNL STTRKTITTC DSQNKNTGAS SNPSSRNPNF QKRRKSSKYG TSRRSILKKS FLQEQVTFTA RVSEDPQVAI
101: IGGGMAGLVC ALNLEARGVK STVFDTGIHG LGGRLGTRFV EPQGLVFDHA AQFFTADDSR FIQYVDGWLE KGLVREWKGA VGELEVGGSF TQFPSSSPPK
201: YIAVNGMRSL ADSLLLESRL ANVVRPCWIS KLEPLNGMWH LSENGTPRGQ FDVIVIAHNG KCANRLLSAS GLPLVAKQMK KLDLSSIWAL LAAFNDPLPT
301: VNFEGAFVKG IESLSWMGNN SAKLGNGGTP HCWTFFSTAA YGKQNKVPQE NIPTVTSEKV KAGMLQGVEI ALGLPEGSLP KPVYTRLQLW GAALPKNTPA
401: VPCIFDPQGR AGICGDWLLG SNLESAAISG EALGNHIADY LQNSEADPEE FAIGLHDRPS PLAGHDIGQF PGLTSVGEKQ EAEAYQLL

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.