Factsheet for VIT_14s0081g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070768	Potato	plastid	69.59	72.71
KRH68746	Soybean	cytosol, peroxisome, plastid	18.2	72.65
KRG96985	Soybean	mitochondrion	51.18	68.88
Solyc01g097160.2.1	Tomato	plastid	70.24	65.6
AT3G04650.1	Thale cress	plastid	67.45	64.81
Bra001116.1-P	Field mustard	plastid	66.81	63.93
CDY40666	Canola	plastid	66.6	63.73
CDX74176	Canola	plastid	66.6	63.73
EES16280	Sorghum	plastid	62.74	61.95
GSMUA_Achr8P03160_001	Banana	plastid	64.03	61.02
Os12t0597400-01	Rice	plastid	63.6	59.76
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	60.81	59.66
TraesCS5A01G059800.2	Wheat	plastid	60.81	59.29
TraesCS5D01G071300.1	Wheat	plastid	60.6	59.08
Zm00001d030962_P001	Maize	plastid	62.74	58.02
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	60.6	56.49
CDY42167	Canola	extracellular	23.55	51.89
VIT_12s0055g01120.t01	Wine grape	cytosol	12.63	44.03
VIT_19s0027g00380.t01	Wine grape	plastid	19.27	24.39

Protein Annotations

EntrezGene:100241002	wikigene:100241002	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	ProteinID:CCB58705
ProteinID:CCB58705.1	UniProt:F6HVJ2	InterPro:FAD/NAD-bd_sf	EMBL:FN596256	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0008270	InterPro:IPR036188	EntrezGene:LOC100241002	wikigene:LOC100241002	PFAM:PF13450
PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	SUPFAM:SSF51905	UniParc:UPI00015CD138	ArrayExpress:VIT_14s0081g00490	EnsemblPlantsGene:VIT_14s0081g00490
EnsemblPlants:VIT_14s0081g00490.t01	unigene:Vvi.23014	RefSeq:XP_002268010	RefSeq:XP_002268010.1	SEG:seg	:

Description

No Description!

Coordinates

chr14:+:8503896..8540051

Molecular Weight (calculated)

50343.7 Da

IEP (calculated)

8.970

GRAVY (calculated)

-0.120

Length

467 amino acids

Sequence
(BLAST)

001: MATFFTTLPK TLTLTLVSGS LSKPNPKKAS SMQGQKPTSR KPRKASYGAS RKSILKKSFN QEQVMFTAPL SDDPAVAIIG GGMAGLSCAL YLEKRGVRST
101: VFDTGVHGLG GRMGTRMIDP QSLIFDHAAQ FFTVGDPRFA QLVDGWLEKG LVQQWQGMIG ELEVGGQFVP LPSLPPRYIG VNGMRPLADS ILSQTTMVNV
201: VRPCWISKLD PFNGMWHLSE NGKPHGQYDA IVIAHNGKCA NHLLASSGLP LVARQMKKLE LSSIWALLAA FEDPLPIPFE GAFVKGVDSI SWMANNTKKL
301: LHSLGSGPHC WTFFSTAAFG KRNKVPQENI PTVTAEKVKE AMLAGVETAL GHSAGSLKRP FYTRVQLWGA ALPTNTPGIP CIFDPHGRAG ICGDWLMGSS
401: LEAASLSGMA LANHIADYFQ SGGARPDEFA VGLHNEFHPL EGHDIGQFPG LGSKEQTDEA QAYQLST

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.