CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030962_P001	Maize	plastid	91.97	86.14
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	78.44	77.94
TraesCS5A01G059800.2	Wheat	plastid	78.44	77.45
TraesCS5D01G071300.1	Wheat	plastid	78.01	77.04
Os12t0597400-01	Rice	plastid	79.7	75.86
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	77.59	73.25
KRH68746	Soybean	cytosol, peroxisome, plastid	16.28	65.81
VIT_14s0081g00490.t01	Wine grape	plastid	61.95	62.74
PGSC0003DMT400070768	Potato	plastid	57.93	61.3
GSMUA_Achr8P03160_001	Banana	plastid	63.21	61.02
KRG96985	Soybean	mitochondrion	44.61	60.81
CDX74176	Canola	plastid	58.77	56.97
Bra001116.1-P	Field mustard	plastid	58.56	56.76
AT3G04650.1	Thale cress	plastid	57.93	56.38
CDY40666	Canola	plastid	58.14	56.35
Solyc01g097160.2.1	Tomato	plastid	58.35	55.2
CDY42167	Canola	extracellular	21.78	48.58
VIT_12s0055g01120.t01	Wine grape	cytosol	8.03	28.36
KXG37426	Sorghum	plastid	21.78	27.25

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	UniProt:C5YQZ6	EnsemblPlants:EES16280	ProteinID:EES16280
ProteinID:EES16280.2	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016491	GO:GO:0016740
GO:GO:0019538	InterPro:IPR036188	PFAM:PF13450	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	EnsemblPlantsGene:SORBI_3008G153200
SUPFAM:SSF51905	UniParc:UPI0003C73884	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:58557062..58559805

Molecular Weight (calculated)

50782.9 Da

IEP (calculated)

7.278

GRAVY (calculated)

-0.104

Length

473 amino acids

Sequence
(BLAST)

001: MPPPPIAAAA TALPAAHLAR VVAASGNGGA NPPRTAPRRG RRGKPGFSRR SAIKKSFHQE QVVFSTPVPA DPTVAVIGGG ASGLSCASAL AARGVRSVVF
101: DTGMHGLGGR MATRFVDGGE QLVFDHAAQF FTASDERFQS MVDEWLDRGL VREWSGLVGE LEAGGRFRAI PSLTPRYIGV NGMRPLADAM LPETDMIKVL
201: RPCWISKLEP FNGLWRLFEN EKPHGEYDAI VIAHNGKCAN RLLSTSGLPL LTKQMKRLEL SSVWALLAAF EAPLPVPCID SRGAFEGAFV RDVDSLSWMG
301: NNTRKLFPMQ TGTPECWTFF STAAYGKRNK VPQENIPKVT AEKVKEDMLG GVEHALGLSK GSLQQPIYTR VQLWGAALPM NTPGVSCIFD PLGRAGICGD
401: WLTGSSIEAA VLSGMSLANH IADYFVSNGD RPEEFAIGLH EDLNAVEGHD IGQFPGLDSQ TPQVAEAQLT PSI

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.